Gene detail

Detailed information of KAK2565480.1 in Acropora cervicornis

Genomic Location: JARQWQ010000019.1:2745997...2747569
NR annotation: PFX21915.1, Tigger transposable element-derived protein 4 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8BUZ3	Tigger transposable element-derived protein 4 OS=Mus musculus OX=10090 GN=Tigd4 PE=2 SV=1
Q8IY51	Tigger transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=TIGD4 PE=1 SV=2
P07199	Major centromere autoantigen B OS=Homo sapiens OX=9606 GN=CENPB PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF04218	CENP-B_N	CENP-B N-terminal DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR007889	Domain	DNA binding HTH domain, Psq-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19303	TRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26544	SEC14, SEC14L; phosphatidylinositol/phosphatidylcholine transfer protein	-	Transporters	ko02000	deepkoala