Detailed information of KAK2566200.1 in Acropora cervicornis

Genomic Location: JARQWQ010000017.1:2756040...2875106
NR annotation: XP_044175386.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114969165 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A6H584Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4
A2AX52Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a4 PE=1 SV=2
P06882Thyroglobulin OS=Rattus norvegicus OX=10116 GN=Tg PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947EGF_3EGF domainDomainInterproscan
PF00095WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan
PF00086Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000716DomainThyroglobulin type-1Interproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR036857Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR002223DomainPancreatic trypsin inhibitor Kunitz domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR020901Conserved_siteProteinase inhibitor I2, Kunitz, conserved siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan
IPR002350DomainKazal domainInterproscan
IPR036880Homologous_superfamilyPancreatic trypsin inhibitor Kunitz domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004867Molecular Functionserine-type endopeptidase inhibitor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06238COL6A; collagen type VI alpha-Glycosaminoglycan binding proteinsko00536deepkoala

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