Detailed information of KAK2566636.1 in Acropora cervicornis

Genomic Location: JARQWQ010000016.1:3167939...3172114
NR annotation: XP_015747716.1, PREDICTED: collagen alpha-1(XXV) chain-like isoform X3 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00229TNFTNF(Tumour Necrosis Factor) family DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006052DomainTumour necrosis factor domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR021184Conserved_siteTumour necrosis factor, conserved siteInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR051748FamilyTumor Necrosis Factor Ligand SuperfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15151PROTEIN EIGERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005164Molecular Functiontumor necrosis factor receptor bindingInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0048018Molecular Functionreceptor ligand activityInterproscan

TOP