Gene detail

Detailed information of KAK2566669.1 in Acropora cervicornis

Genomic Location: JARQWQ010000016.1:1762634...1788056
NR annotation: XP_029207635.2, transmembrane 9 superfamily member 2-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAK2566669.1

ATGGCCGAACGAAAGAGTAAAATTGAACTTTTTGTCAATCGACTGGATTCAGTGGAGTCTGTGATTCCCTATGAATATTCAAGTCGCAAAACCAATGAAGTCCCTCGGGTGGTTTTGGGGGAACGAATTGCTCCTTCAGGCTACAATATCACCTTTAAGGTAGAGAGCCAGTGTAAGACTCTATGCAAAAAGAAATACAGCTCTGGAGATGTGGATAAAATGAAGAAGTTGGATTTCTTGAGAAATGGAATTGCTCTCAACTATCAAAACCATTGGATCCTGGATAACATGCCAGTTGCATCGTGTTATGAACTTGCAGATGAAGAGAAAAAATACTGTTCCACAGGCTTCCCTATTGGATGCCATGTGTCTGATGATGGGCAAGTACAGGATGCCTGTGTCACAAGTAGCAAGTTCAATGAGCGCGGTGTGCATTATGTGTTCAATCATGTGGATATTGTAATCAAATATCATAATGGTTCCAATGAGGACTGGGATGGAGCCCGGCTTTTGTCTGTTGTAGTAAATCCCAAAAGCATAAAACATAAGGAAGGAGAATGCACTGGTAATCTTCCAGTCATGGGGATACCTAAAAAACTCTCGGGGGACCTGGAAATCATTTACTCTTACTCTGTTACATTTGCTGAGGAGGGAAATCCAGATCACAAGTGGGCTTCACGTTGGGACTACATCCTTGACTCCATGCCACCGACAAGGATCCAGTGGCGCAGCATCATGACTTCTTTGGTCATTGTGCTGTTTTTGACTGGAATGGTAGCGATGATAATGCTAAGAACCCTGCACAAGGACAATAAATTGGATTCAGCCATGAAGAAGGATGGCTGGAAATTGGTTCATGGAGATGTGTTTCGTCCTCCAAAGAAAGGCATGCTGCTTTCTATTATGCTTGGTTGTGGCACGCAGATTTTCATCATGTTGTTTTTCACTTTAGTGTTTGGATGTCTTGGGTTTCTGTCTCCTGCAAATCGTGGAGCCCTCATGACTTGCTCTTTGCCTAAAGTGGATTTTTACCTTGAAAACCAACATATCGCCGACATTCCTCATTTCATCGCCAAGCCACGTGTACAGAATTGCACTCGAAAGAACAGGCCTTGTTGTTCTACCAGGTCTCGTCTTATTTACAGCTCCTCATTAAGACTTTCTCTAAGCGGAGACATTAACCTCAATCCTGGCCCTGCAGCTGCGTCAAATAACAGCCCTAAGTGTCCAATTTGCGAGAGAGCTGTCGCCAAAACTCATCGTGCAGTAGAATGTGATATCTGTCTTCGTTGGTGCCACATAAAGTGTGGAAGAGTTAGTCCAAGTGAATACGACAAGCTTCAGCTCCTCGATCATTTTTACTGGAACTGTCCTTCCTGTGAACTAAGGGCTCTCCCCTTTGCTGATGCCAGTTTTCCTGACTCAAACCTTGATGATGACTTAGCGTCTGAACCTGACGAAGATGTTTTCACTACACTAAAAACTATGATGGGCAACAACAAGAACTTAAAAATAGGACACATAAATATCAATGGTCTTGCTAGTAAATTGACTGACATTCAATTCCTATTAAAAGAAGTTGAATTCGACATCCTGGGCATTACTGAGACCCACCTGACCGAAGACATATCAAATGAATTAATCAGAATACTCGGCTATAACATGGTGAGAAGAGATAGATCAAATGGCTCTAAAGGCGGTGGCGTGGTAATATATTATTGCGACAATTTGAATATTTTTGAAGACCTAAAATGGAACATTCATCAGGACTTTGAGGCTGTATGGCTTAATATTACCATAAGATCACAGTCTACTTTACTTGGTTGTTTATACCATCCACCTAAATCAACCATGTTTTATAGTGACTTACATGACCTGCTTAATAAAATATGGGTCAAAAGGAAGAATGTGATATTACTCTGTGATTTTAACTGTAATCTCTTAGCTAATACTGCAGATACAGATCAAGATGCGCCATATGACAGTAATAGAATGAAAAGAATTCTTAGGCGTTTTGGGTACTTTAACATCATTGCATCACCAACACATATCACAGCTAACTCTAAGTCACTTATCGACCTCATTATTGTTAGCCCTAATCTGCAGGCATCAAATGTACTAGCTGGTTCTATCGACTTGGGCATATCAGACCATCATCTTATATATGCTGCTTTTTCTACAAGGAGGAGTAACTCAAAGCCTAAATTTATTACAGTGAAGAACTACAAGGATCTGGATAATGTAAAGCTCCAAAGGAACTTAGAAGAAGCTCCATGGCATATTCTGTCTGCTGTAGAGGATGTTGAGGACAGTGTCTACTTATGGGAAACCATGTTTAAAGACATTATCGAGTCCAACATTAAACGAAGGAATGTAAAGGTCAGACACAAGTCACTACCCTGGATCAACACCGAAATTAGAAAAGCTATGAATCAAAGGTATACGTGTTTAAAAGCTGCCCAAGGTAAACCCCATGATAATCCCCAGTGGGATATATACAGAGCTAAAAGAAATGCTGTTAGAAGAATGCTAAGGAAAGCTGAGGCCTCTTATTGGATTGGGTTATTTGAAGAATCTTCTTCACCTAAAGATTTCTGGAAAATATGCAATCGTGTACTTGGTAAGAGTAAAGGTGCTAAGATTGGTCCTCTACAAGACTCTAATAACACTATTATTACAGATGATAGGCAGAAAGCAAATTTAATTAACAATTATTTTATTAATATTGCACATAACCTTACTAAGAACTTGGACCCAGTACATTTAGATACCACTTGTTACATTAATAGAATTACACCCACAATAGAGAATTTCTCTTTGAATTGGGATATAGTCAGAGACACTTTAAAGTCTATTAATCCAAACAAAGCAGTGGGCCCTGATAATATTTTTGCTAAAGATCTTAAATTGGCACAAGGCTCTGCTATTGAGGGTCTGCTAGAGGTGCTATTTGTTTGCCTCGGATCTCCAGCTGGGTATGTCTCGGCAAGAATTTACAAAATGATTGGTGGAGAATTGTGGAAGACCAATGTCCTGCTGTCAGCATTCTTTTTTCCTGGATTAATGTTTGGCATTTTCTTCCTGTTGAATCTTGTTTTGTGGGGTGAAGGTTCATCTGCAGCTGTCCCATTTACAACTCTGCTTGCTTTGTTAGCTATGTGGTTTGGTATTTCAGTTCCTCTAACATTCCTGGGCGCGTATCTTGGATTTAAAAAGAAGAGCATCTACACCATGGCCGGTCCAGGAATAATTATGGGAGGAGTTCTTCCTTTTGGCTGCATATTTATCCAGTTGTTCTTCATCTTAAATAGCATCTGGTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q66HG5	Transmembrane 9 superfamily member 2 OS=Rattus norvegicus OX=10116 GN=Tm9sf2 PE=2 SV=1
P58021	Transmembrane 9 superfamily member 2 OS=Mus musculus OX=10090 GN=Tm9sf2 PE=1 SV=1
Q5R8Y6	Transmembrane 9 superfamily member 2 OS=Pongo abelii OX=9601 GN=TM9SF2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF02990	EMP70	Endomembrane protein 70	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR004240	Family	Nonaspanin (TM9SF)	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10766	TRANSMEMBRANE 9 SUPERFAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0072657	Biological Process	protein localization to membrane	Interproscan