Genomic Location: JARQWQ010000015.1:3643781...3658816
NR annotation: XP_029192656.2, WD repeat-containing protein 48-like [Acropora millepora]
| CDS | |||||
| KAK2566943.1 | |||||
| Transcript |
| - |
| Protein |
| KAK2566943.1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q8TAF3 | WD repeat-containing protein 48 OS=Homo sapiens OX=9606 GN=WDR48 PE=1 SV=1 | ||||
| Q5F3K4 | WD repeat-containing protein 48 OS=Gallus gallus OX=9031 GN=WDR48 PE=2 SV=1 | ||||
| Q5RAW8 | WD repeat-containing protein 48 OS=Pongo abelii OX=9601 GN=WDR48 PE=2 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | ULD|UFD|RAWUL |
| Ubiquitin Family | ULD|UBL|SUMO |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF11816 | DUF3337 | Domain of unknown function (DUF3337) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR051246 | Family | WD repeat-containing protein 48 | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR021772 | Family | WDR48/Bun107 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19862 | WD REPEAT-CONTAINING PROTEIN 48 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0000724 | Biological Process | double-strand break repair via homologous recombination | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15361 | WDR48, UAF1; WD repeat-containing protein 48 | - | DNA repair and recombination proteins | ko03400 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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