Detailed information of KAK2567375.1 in Acropora cervicornis

Genomic Location: JARQWQ010000014.1:497979...517622
NR annotation: XP_044163480.1, LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0MQH0Endoribonuclease Dicer OS=Cricetulus griseus OX=10029 GN=DICER1 PE=2 SV=3
A0A974H8H3Endoribonuclease Dicer-L OS=Xenopus laevis OX=8355 GN=dicer1.L PE=2 SV=1
Q6TV19Endoribonuclease Dicer OS=Danio rerio OX=7955 GN=dicer1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03368Dicer_dimerDicer dimerisation domainDomainInterproscan
PF02170PAZPAZ domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF20930Dicer_PBDDicer, partner-binding domainDomainInterproscan
PF20931Dicer_platformDicer, platform domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF20932Dicer_dsRBDDicer, dsRNA-binding domainDomainInterproscan
PF00636Ribonuclease_3Ribonuclease III domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005034DomainDicer dimerisation domainInterproscan
IPR038248Homologous_superfamilyDicer dimerisation domain superfamilyInterproscan
IPR000999DomainRibonuclease III domainInterproscan
IPR003100DomainPAZ domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR048513DomainDicer, partner-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR048512DomainDicer, platform domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR044441DomainDicer, double-stranded RNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14950DICER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016891Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016442Cellular ComponentRISC complexInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0090501Biological Processobsolete RNA phosphodiester bond hydrolysisInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0031054Biological Processpre-miRNA processingInterproscan

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