Genomic Location: JARQWQ010000014.1:289586...300731
NR annotation: XP_015769319.1, PREDICTED: protein NRDE2 homolog [Acropora digitifera]
Species abbreviation ACERV · all data for this species · gene families
| CDS |
| KAK2567480.1 |
| Protein |
| KAK2567480.1 |
| UniProt accession | Description |
|---|---|
| Q9H7Z3 | Nuclear exosome regulator NRDE2 OS=Homo sapiens OX=9606 GN=NRDE2 PE=1 SV=3 |
| Q80XC6 | Nuclear exosome regulator NRDE2 OS=Mus musculus OX=10090 GN=Nrde2 PE=1 SV=3 |
| P19838 | Nuclear factor NF-kappa-B p105 subunit OS=Homo sapiens OX=9606 GN=NFKB1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005890 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08424 all species → | NRDE-2 | NRDE-2, necessary for RNA interference | Family | Interproscan |
| PF12796 all species → | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR002110 all species → | Repeat | Ankyrin repeat | Interproscan |
| IPR013633 all species → | Family | siRNA-mediated silencing protein NRDE-2 | Interproscan |
| IPR036770 all species → | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13471 all species → | TETRATRICOPEPTIDE-LIKE HELICAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0031048 all species → | Biological Process | regulatory ncRNA-mediated heterochromatin formation | Interproscan |
| GO:0071013 all species → | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| GO:1902369 all species → | Biological Process | negative regulation of RNA catabolic process | Interproscan |
KAK2567480.1.
