Gene detail

Detailed information of KAK2568365.1 in Acropora cervicornis

Genomic Location: JARQWQ010000012.1:1970522...1990586
NR annotation: XP_015776009.1, PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like isoform X5 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAK2568365.1

ATGACAACACTCGATAGTGAAAGCCCCGAGAGTAACTCTGACAACATGAATGATGATCCCAGAGAGGAATTTGTTGTCCGTGCACGCGGATTGCCTTGGTCTGCAACAGCAGAAAGCGTGGCGGAATTCTTTTCAGATTGTAATATCCGTGGTGGTGCCAAAAATGGGATTCATTTCACATACAGTAGTGAAGGACGCCCAAGTGGGGAATGTTTTGTGGAACTTGTTTCCCTAGAAGACATGGAAAACGCTCTTGCCAAAAGCAATAACTTCCTTGGTAAGAGATATGTAGAGGTGTTTGAATCTAAAGCTGGAGAGATGGAATGGACTTGTAAAAGAATGGGCCAGCCCCAAGACAGAGGCAACGAGGCAGTGGTTCGACTAAGGGGCCTACCATTTCAAGTGTCTAAGGAAGAAATTGCACAGTTTTTTACAGGGCTGGAGATAGTTCCTAATGGGATAACAATCACTCTGGATGAGGACGGGCGGACTACGGGGGATGCTTTTGTGGAATTTGCTTCTCCTGAATTAGCTTCTCAAGCTATGAAAAAAAACAAAGAATCCATAGGGCACAGGTACATTGAGATCTTCAAGAGCTCTAAAGCAGACATTAAATATGTGTCAAAGCCAAAACTCAAGCCTTTAATGTCCACTCGACCTGGTCCTTACGATAGATCACCTGGTGGCTTTGGAGGTGGACGGGGACGATTTGGTGGTGTTGTGGCGGGAGATGGCAGAAGATTCAGAGGACGAGGAGGTCCTGTTTTTGGAGGGGGTTATGGTGGGGACTACAATGGGTATGGAGGGGGACGTGGAGGATCAGGCCGTGGTGGCCGTGGTGGCAGAGGCATGGGTGGCAGAGGAGGATTTCGTAATCAGGGACGAAGTGGCGGGGGTGGTAATTTTGGATCTATGTCCTCTACTGGTCACACTGTGCACATGCGAGGATTGCCTTTTGCAGCAAAAGAAAGTGATGTGAAACAGTTCTTTATGCCTCTTAACCCTGTCAACATTTGGATGGAATATTCCGGGGGCTCGTTCAGTGGTCAAGTTGATGTTGACTTTGCAAGCCATGAGGATGCCCAAGCTGCCATGTTGAAGAACAAACAGTCAATGGGTCATCGTTATATTGAGTTGTTTTTACGCTCCCAACCTGATATGGAAGATGTCTCTGGAAGGGGTGATAACTTCAGTAGAAATAACTTTGGCAGTGGAAACTTTGGAGGAAACTTCAATGCAGGAGATAACTATAGGAACTTTGGAGGTGCAGGTAGCAGCTTTGGAGGCAATCAAACCAATATTGGTGGGTTTGGAGGCCAAGCAAACCAGAGCAGTGGCTTCAACAGCCCACAGCCACAACAGCAACAGCAGCAGCAGCAGCAGCAGAGTAACTTCAGCAACCAGATGGGAGTAGGCGGCGGTGGTGGGAGTTTTGGAAATCAAGGCAATTCATTCAGCAGTAATGCAGGAGCATTCAATGCCGGCCCAAGTCCAGGCGGTGGAAACTACAGCGCACAGAGTTCATACGGACAAACCACTGGCTTTAGTGGGTCAGGGTTTGGAGGTCAGATGTCTTCGGGGCTGAGCACTGGAATGACAACTGCAATGAATACTGGGATGAACACAGGCAGTTATGCAGCACAAGCCAGTGCTTATAGCAACCCCACGCAACAGAGCACCCCATTCAACCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGGCTGCATACGGCGATGCTTCAGCCTATGGTGCAAGCGCCAGTGCATCGTACTTCGCAAACATGCAGACGCCAATCAAGCAGGAACCACAGTCTGCAGGAACGGCTGGCATGGTGTCTTATCCTGGTTACCATGGCGGGCGATCCACAAAAACCTTTAAGCCAAAAAAGAACATCCCGGAGGGAACTCATCAATATGATTTGATGAAACAAGCGGCGGCAACACTTGGAAGCGGCAATTTACGACTTGCTGTCATGCTTCCAGAGGGAGAAGATCTCAACGAATGGGTCGCTGTCAACACTGTGGACTTTTTCAACCAGATCAACATGTTGTACGGAACAATAACAGAATTCTGCACTGTAGAATCGTGTGCGGTTATGTCTGCTGGACCAAAAAAGTCTTCTTCTTGTATCAATTTTCCAATCTGTGACTTCTTGGTTCCTAGTGAAAATAATGTTATGGGTAACTTACTTCACAATACAGACAAAATTGAAAAGGTCATTTTGACTGATATGAATATCATTGGGCAGATGGAACGACCATTAAAAAACCCATCAAGTGCTCTGCACCCAAATATATTGACTACCTCATGA

Transcript

Protein

Uniprot

Uniprot term	Description
P55795	Heterogeneous nuclear ribonucleoprotein H2 OS=Homo sapiens OX=9606 GN=HNRNPH2 PE=1 SV=1
Q5RD26	Heterogeneous nuclear ribonucleoprotein H2 OS=Pongo abelii OX=9601 GN=HNRNPH2 PE=2 SV=1
P70333	Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03637	Mob1_phocein	Mob1/phocein family	Family	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR005301	Family	MOB kinase activator family	Interproscan
IPR050666	Family	Epithelial Splicing Regulatory	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR036703	Homologous_superfamily	MOB kinase activator superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13976	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan