Gene detail

Detailed information of KAK2572379.1 in Acropora cervicornis

Genomic Location: JARQWQ010000004.1:5906186...5908263
NR annotation: XP_015754796.1, PREDICTED: NK1 transcription factor-related protein 1-like isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q06615	Homeobox protein notochord OS=Xenopus laevis OX=8355 GN=noto PE=2 SV=1
Q91770	Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 SV=1
A6NJ46	Homeobox protein Nkx-6.3 OS=Homo sapiens OX=9606 GN=NKX6-3 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR050877	Family	EMX/VAX/Noto Homeobox Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24339	HOMEOBOX PROTEIN EMX-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan