Detailed information of KAK2572526.1 in Acropora cervicornis

Genomic Location: JARQWQ010000004.1:623756...645399
NR annotation: XP_029198030.1, PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5F450PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Gallus gallus OX=9031 GN=PAN2 PE=2 SV=1
Q8BGF7PAN2-PAN3 deadenylation complex catalytic subunit Pan2 OS=Mus musculus OX=10090 GN=Pan2 PE=1 SV=1
Q504Q3PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Homo sapiens OX=9606 GN=PAN2 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20770PAN2_NPAN2 N-terminalRepeatInterproscan
PF00929RNase_TExonucleaseFamilyInterproscan
PF13423UCH_1Ubiquitin carboxyl-terminal hydrolaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050785FamilyPAN2-PAN3 complex catalytic subunitInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR030843FamilyPAN2-PAN3 deadenylation complex catalytic subunit PAN2Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR048841DomainPAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminalInterproscan
IPR013520DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR028881DomainPAN2, UCH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15728DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0031251Cellular ComponentPAN complexInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12571PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2EC:3.1.13.4
Messenger RNA biogenesisko03019deepkoala

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