Detailed information of KAK2573018.1 in Acropora cervicornis

Genomic Location: JARQWQ010000003.1:1164513...1193751
NR annotation: XP_029197886.1, paired amphipathic helix protein Sin3a-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60520Paired amphipathic helix protein Sin3a OS=Mus musculus OX=10090 GN=Sin3a PE=1 SV=3
Q96ST3Paired amphipathic helix protein Sin3a OS=Homo sapiens OX=9606 GN=SIN3A PE=1 SV=2
Q62141Paired amphipathic helix protein Sin3b OS=Mus musculus OX=10090 GN=Sin3b PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02671PAHPaired amphipathic helix repeatRepeatInterproscan
PF16879Sin3a_CC-terminal domain of Sin3a proteinFamilyInterproscan
PF04191PEMTPhospholipid methyltransferase FamilyInterproscan
PF08295Sin3_corepressSin3 family co-repressorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003822RepeatPaired amphipathic helixInterproscan
IPR031693DomainSin3, C-terminalInterproscan
IPR036600Homologous_superfamilyPaired amphipathic helix superfamilyInterproscan
IPR024960FamilyPhosphatidyl-N-methylethanolamine/Phosphatidylethanolamine N-methyltransferaseInterproscan
IPR013194DomainHistone deacetylase interacting domainInterproscan
IPR039774FamilyTranscriptional regulatory protein Sin3-likeInterproscan
IPR007318FamilyPhospholipid methyltransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12346SIN3B-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006656Biological Processphosphatidylcholine biosynthetic processInterproscan
GO:0008757Molecular FunctionS-adenosylmethionine-dependent methyltransferase activityInterproscan
GO:0000118Cellular Componenthistone deacetylase complexInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0016580Cellular Componentobsolete Sin3 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11644SIN3A; paired amphipathic helix protein Sin3a-Chromosome and associated proteinsko03036deepkoala

TOP