Gene detail

Detailed information of KAK2573060.1 in Acropora cervicornis

Genomic Location: JARQWQ010000003.1:3397855...3413898
NR annotation: XP_029200152.2, signal recognition particle subunit SRP72-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P33731	Signal recognition particle subunit SRP72 OS=Canis lupus familiaris OX=9615 GN=SRP72 PE=1 SV=3
O76094	Signal recognition particle subunit SRP72 OS=Homo sapiens OX=9606 GN=SRP72 PE=1 SV=3
P49965	Signal recognition particle subunit SRP72 OS=Schistosoma mansoni OX=6183 GN=SRP72 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12895	ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	Repeat	Interproscan
PF08492	SRP72	SRP72 RNA-binding domain	Domain	Interproscan
PF14559	TPR_19	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR026270	Family	Signal recognition particle, SRP72 subunit	Interproscan
IPR013699	Domain	Signal recognition particle, SRP72 subunit, RNA-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14094	SIGNAL RECOGNITION PARTICLE 72	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006614	Biological Process	SRP-dependent cotranslational protein targeting to membrane	Interproscan
GO:0005786	Cellular Component	signal recognition particle, endoplasmic reticulum targeting	Interproscan
GO:0008312	Molecular Function	7S RNA binding	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:0048500	Cellular Component	signal recognition particle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03108	SRP72; signal recognition particle subunit SRP72	-	Secretion system	ko02044	deepkoala