Gene detail

Detailed information of KAK2573562.1 in Acropora cervicornis

Genomic Location: JARQWQ010000002.1:4777109...4783551
NR annotation: XP_029186265.1, uncharacterized protein LOC114953975 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAK2573562.1

ATGCCAAGATCCTTTCTCGTCAAAACTACTAAACGCCGTGACCACCAAACCGAGATGGAGAGCAACACTGATCACTGCAGTACCAAAAAGGAAGACTTATTCGCCTCACAAAACGCCATGTCATTTGACAGATACGAGGACACGTTAAGACGTTTGTACAAGCTTTCTGGGGAAAGCATGTGGCTAAGACACGGCCACAAACTGAAGCAGAGAGACACGAGAAGAGAGAAAATAGCAAGTGAAGCAAGCTGTATGAGGACTGTCACAGCTAAACAAACAACGGGAAATAGAGAGCAAATCCCTCCACAGCTGTGGTTTTTTCCACCGTTATCCAAGAAAGACTTGCACAACAATTTGAATTGTTGCTCTCCTGGCTCCGAAAAGGAAGCTTTGGCTCCTTTCGATTTAATTTATGATAAAGAGCGAGAAAATGTATCAATCTTCAACCGTGATCTGAAAACGAGAGAGGACAAAGTCACTAAGACATGTGACACAAATTACTTTGGAACACAAGAGAGCGTCAACCAAAATGACTATTTCCCGGCTAATCATGTTAATATACGCTCGGCCAAATGGATACCACCACTGTTTTATCCATTTCCAAGACTAAAATTCATCGCCCAAGATCCAAGGGAGAATGGAGAGCATTACATCATGGTTCCGTTTGAACATGGCTCCTCAAGAAACCGCATTTTGGTATCAACGAAAAGGCCATTAGCGAGAGACGAAGGCGAGAAAACATCCACCGACAAGAACGATTTCGAGTGTGAGGAAAATTTGCACATTCCATCGAAGAGGAGAAAAGAATATGAAACTGAAAAGGTCCGGCACAAGGAGGAGGTTGGTGATTTTGAGGAGTCCTCAGCGGAAGAACAAAAGAAGGCTTGTGAAACAGAGAAGTTGAGTCCAAAAAGCTTCCCAAGTTTTAAAGGAGACTGTAAGCAAAAAGAGTTAATTAAATTAGCCAGGGATACCAAGCCGTTTGGACCAGAGGGAAACCAAAGGACTCCAGAACCAAACGTCTCAAACGGAGAACAGATGCACAGTGCAAAACAAAGCGAGTGTAAGAAGGCAGTGACCAAAGAGCATCTTCTGGGAGATGACCTCAAGTGTGATTTCCAGAAGCGGTACAGCTCTCGTGATTGGTACGTTCCCGCGCCATTTGTCTCAAGAGTTGTAGAAGAAGCAGGAAACACTGGGATATCCCAACGCAGTTCTGTTTGGATTCCTCGTAAAACGAACATTTGGAATGACGTTTTGGAAGATTTGTCCAAGAGAAACAGTTGGGAGGGCAAAGGTTTTTGGGGCAATGTTATACAGAGTGAGGTGTTCAGTACTGATGACAATCCCAAAATTTATCCACCTCATTTTCCTGTCAATCCAGTTTCTCCAAACGACAACCATCGCGTTCACGAGAATTCCATATCATTAAACCAGCTGGAATCAAAGAGGAGGCAGAAAGTAAGGGCTGTTTCTCCAGATCACAGCAACATCAACATTACTGGCCGTCTCAGTGACGACCCGCAAATGGGAACGGTTAAGCCTGTCCGCATTGATGAGTGTATAAGCCCTTCGGGATGTAGAGACTATGGACAATTCAGCAACTTACTTAGATCTCCGGATCACGCCAAGGCATATGAAGGAGTAGAACTTCAAGGTGGTAACAAACAAGGAGATCCTTATCCTTCACTACTTTACCGAAAGGTCGAGGACGTTGACAGCGATAAAACCAACGGCAAAGTATTTTCAGATCACTCAACTTTGGCTCTGCTGAACAAGGAGAGAAAAACACCAAGGGCCATTCCAGAAGTTCCTCTTATCCTATCTAGCCCACCCAGTCCATTTTGGACAGGGACCAACAATGGGAGTGGGACAAAGCACTTTGATGCTCTTACTGGCAAACGTCCCGAAAGATCAACAAAGGGAAGGCAAAACTCGACCACAAACCATCACCACAGATGTGAAATCTGTAACAGAAGTTTCCCACTTCGACGACTACTCAATCGGCACCTCAAGACACATTCCTTCTACAAGCGGCATCCTTGCAAGTATTGTGACAAAGGCTTCAACGATACTTTTGATTTGAAGCGTCATGTTAGAACACACACGGGTATCAAGCCATTTAAGTGTGACAAATGTGATAAGTCGTTTACCCAGCGTTGCTCATTGGAGGCACACCAGTCACGCATCCATGGAATCACGCACGAGTTTGGGTTTCGTGAGAGGCGTTCCAAGGTGTTTGTTTGTGAAGACTGTGGTGCCACATTTAAGGAGGACCAATCAGAGTTCATGAATCATGTGGCGCACTATCACCCGGAAAAAGACAAACCTCAAAGTGCTTTATCCAAGAGGAACAATAGAATTACAAAAGTTGGATTTTAG

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
G5EDU6	Transcription factor ovo-like homolog lin-48 OS=Caenorhabditis elegans OX=6239 GN=lin-48 PE=1 SV=1
P51521	Transcriptional regulator ovo OS=Drosophila melanogaster OX=7227 GN=ovo PE=1 SV=2
Q8CIV7	Transcription factor Ovo-like 2 OS=Mus musculus OX=10090 GN=Ovol2 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR027756	Family	Ovo-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10032	ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan