Gene detail

Detailed information of KAK2574086.1 in Acropora cervicornis

Genomic Location: JARQWQ010000001.1:7321938...7329503
NR annotation: XP_044173881.1, uncharacterized protein LOC114967171 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAK2574086.1

ATGTTTCGATTGATCATCGATTACCTTCAGTTGCAAGATATCGATGAGTGTGCGTCTTCTCCTTGTGACAAGAATGCAACCTGTCAAAACACTTTCGGCTCATACGTTTGTACATGCAATCCTGGTTACGCTGGGGATGGAAAAAGATGTGGAGTTCCTATAAAATCTTGTTCAGCGTACAGAGATCGCCCAGAAACAGCTGACGGAAGTTATATGCTTGGTATTGGCCAATCTTTGTTCCCGGTATATTGTGATATGACAGATGGTGGTAAAGGTTGGACGCTCGTTGCACGATTCTCAAACAATGATGAAAAAAAATGGATGTTTTATGGTGGTCTATGGTGGTACGACACCATAACGCCTCATGGAAACGCAACCGATCCGTCAGAAAACAAAGACATGATATCCGAGGCATTCTGGCTCGTCAAGGGAACCGAGTTCAAAATCACACGCAGTGACGATCCGCAACATACTCCACTGCTCCAGACCACGGGAAACTGCCTGGGTCGACAGACGTTCAGATCCAAAATGACAAACTATGGAAATTTCAGGGGATCTGTTTGGAGCAGTAGCAGTTGTAGGGGACGTTGTGCGGTGCAATATGGCGGCCAGTATAAGAGCACTCAAGGTTTTGGACAAGCAACGTGTAGCTCCAATCTTCAAAGTGCCAACAATATCGGCTTCTGGTGTGACTGGACTATTGGCGATGGTTCTGTGATGATGATTGGCGGAGGAGGATCTTCATGTTCACGTGCCGATCATGGGATTGGCATCACGGAACAAAACGCTGCCTCTTTTGCGTCGACTTCGCTTAAATACGATTTTGGCAACGACGCCTACTATTCTTACCCCTCAACTAGGAGCTACTCCTTGAATCTATGGATCGGTAAACATAATGTATTTGACTACGTGTTGAGGAAGGCTGGCGCTGTGGTTAGGATAAGATTACTGCTTCTCTTGATTGAAAAAGATCATCGGGGTGATTGGAGTCCTGAGAAGGACTGTTTTTTGTTACTGACGTTTCGACAACCAGTGCGGAAGCCATCTCCAGGGACAAGTGATAGTCTTAATGCTGATGAATGTGTTGCGTCCTCGTCACTTTGTCACACCAATGCCACGTGTAGGAACGCAGATAACTCACATACTTGTTCCTGTAAGCCTGGATTTCTTGGCGATGGACTGAATTGTACTGATATCAATGAGTGTGCGTCCTCTCCTTGTGACAAGAATGCAGCCTGTCAAAACACCCTCGGCTCATACGTTTGTATATGTAATCCTGGTTATGCTGGGGATGGAAAAAGATGTGGAGATGACAACAGGACTTGTGCAGCCTACAGAGATCGTTCAGAAACAAATGACGGGACGTTCACCCTTGGTTTGGGAGAATCTTTATTCTCGGCATATTGTGATATGACAAGTAATGGCCAAGGCTGGACTCTCGTCGCACGTTTCTCAAACGCTGATGCCAAAAATTGGATGCAAGGCAACGGTTTATGGTGGTATGACATCACAACACCTCGTGGAAAAACTCTTGATCCGTCACACAACATGGATATGATATCGGAGGCATTCTGGCGCGTCAACGGAACCGAGTTCAAAATTACACGCAGCGACGATCCACAACATACTCCACTGCTGCAGACCAACGGAAACTGCCTAGGTGGACAGACGTTCAGATCCAAAATGAAAAGCTATGGAAATTTCAGGAGATCTGTTTGGAGCACTAACAGTTGTAGGGGACGTTGTTCGGTGCAATATAGCGGCCAGTATCAGAGCACTCAAGGTTTTGGAAAAGCAACGTGTAGCTCTAATCTTCAAAGTGCCAACAATATCAGCTTCTGGTGTGACTGGAGTACTGGCGATGGTTCTGTGATGATGATTGGCGGAGGAGGAGATTCGTGTTTACGTGCCGATCACGGGATTGGCATCACGGAACAAGGCTCTGCACAATTCGGACCTGAGTCGTATTCTCATGAATTTGATTTCGGCGATAATGCCGACAAAACTCCAACTTCCAGCTATTCATTGAACTTGTGGATTCGTTAG

Transcript

Protein

Uniprot

Uniprot term	Description
A2AVA0	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Mus musculus OX=10090 GN=Svep1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12947	EGF_3	EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR050751	Family	Extracellular matrix structural protein	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR024731	Domain	EGF domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24034	EGF-LIKE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan