Detailed information of KAL9951275.1 in Oculina patagonica

Genomic Location: chr14:15291530...15306679
NR annotation: CAH3104345.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91XP5Glycine receptor subunit alpha-3 OS=Mus musculus OX=10090 GN=Glra3 PE=1 SV=2
P24524Glycine receptor subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Glra3 PE=1 SV=1
O75311Glycine receptor subunit alpha-3 OS=Homo sapiens OX=9606 GN=GLRA3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09093Lyase_catalytLyase, catalyticRepeatInterproscan
PF09092Lyase_NLyase, N terminalDomainInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF02278Lyase_8Polysaccharide lyase family 8, super-sandwich domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR008929Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR015177DomainLyase, catalyticInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR015176DomainLyase, N-terminalInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR039174FamilyChondroitin sulfate ABC lyaseInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR003159DomainPolysaccharide lyase family 8, central domainInterproscan
IPR011071Homologous_superfamilyPolysaccharide lyase family 8-like, C-terminalInterproscan
IPR014718Homologous_superfamilyGlycoside hydrolase-type carbohydrate-bindingInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR006028FamilyGamma-aminobutyric acid A receptor/Glycine receptor alphaInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37322-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0006027Biological Processglycosaminoglycan catabolic processInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08961K08961; chondroitin-sulfate-ABC endolyase/exolyaseEC:4.2.2.20
EC:4.2.2.21
Enzymes with EC numbers-deepkoala

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