Gene detail

Detailed information of KAL9951371.1 in Oculina patagonica

Genomic Location: chr14:16656924...16684159
NR annotation: KAJ7330575.1, hypothetical protein OS493_022188 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G044024.t0

tcaagttatggaaccgttccggaccggttccagaaccgtcctgtgtaaacacatggatcggtgccaaacgcttccgtgtaaacagaggccgatccggtccggtccagttcggaacggctccggtccggtcccgtgtaaacgtagcctagctggttagagtataaaaatgactgaaaaaacggcaaggacaggaccaacaccaggtgtccgtcttatagagatcttcaataagggagagttgactctacaactgttttgccttagcctaatcaagaatttgaacaagggtaagaactggataaaaaatatgcagcaaagcgaagcaacgcaacagaagaactttcgacccggaagttaaaaacgctttcatgcaaccatttaacaactctctcgaacggtggcttactgaagtgaaacttaattacaagttcagcccaaaaaattttcattgagagcttatgttaaaataataaaaataatgcttCAACCAATacaccaaaaagcagggtgctttctggtcacggtggttgtcgatttcatgtgccggaagttactcaagtgtgaattaattatctgcataccgcaggacaatttggccgacaaatctcaaatggcggttttcgaaacgaagattccccggccgtatcgatttatctaccactgctgctaagctttaagttgatttaaagcaaagtacttcgtattcctgtttacactgatcagttaagactggactgttttcaagaatgcatggaaaagaactgtcacttcaagacgtggaaatcagttacaaatggcgcgtcaagaaaataggataacagcttcgccgagggcttaggttttgtcgtaaatgaggaaaacaggatttacaatgtatcagcgaacaccacgGTGCCCATGGTTTTTTGTGTCGACGAGAGAGGAATCATTGAAGAGCCATATCAGACGCCGGACTACCTGGCAAGGAAAAAGGGCTTTGTTATCATAGTTCAGGAGTTGTACAAATGGAAGAATTTACCTGTTGCTAAAGTTCTCTTCTGCGATTGTCAACGGTTTGCTGACATGCTTCGCAATAGGTCGTCTGTCAAACAATTAATGGGAGCTTTCTTCTCCATAACGTGGCGTCGTTCAGTCCAAAGAATTGTGGCTGATGAACAGGAGAAGAGGTTGTTTCGTAAAATGTTATACACAAACGCAGCTCGAGTTACTCAAGATAGTGAATCTGATGTTTGGAAGAATTCatttatttctctcttgtttccAAGAGAAAAACCCTTCAACCCAATTGGAGCAGCGGGGAGGTTTGCCAGGAAAACGAAAGGCTTTCCATTCAACCCATTTTTTCCACCAGACACTAGCGACTCCGAAGAGGACTTTCCTCCAGATGGCTTTTCTGAGTTCTTGGCAGACTTATTTCAACTCCAAATGGATCCGTTTGACACGGAAGTGGATTATCCGTCCGTTTTTGATCCCCCTCAGTGGGCACCTCCTCTAAGTGAACCAGAATGTGCCTTTTGCCATTCAAAGACTGGAACACTAAAGAGATGCTCTGGCTGTAAGAGAGTGTTCTACTGCAGTAAGAAATGCCAGAAACTTCACTGGAAGGAGCACAAACCACACTGTCAAAGTAACAATTAGGAAACCAAAAACATCTACTCAgctttactattttttgtttacattaaCGCTGATAAGGAGCACATACATCAAGAGCTTTTACACATGACGTCACGTCAGCCAAACGTCTATTCTTCGAAAAATGAGTTCTAGTCTTATGGAAACATTTTCTGTTGTTAGGGGGGCATCAAAATAGCGCTACaaaaaatttattgttttaacgCTTTATAGATCTTTACGTCTTGAAATCAGCGAAATTGATCACGAAACAAACGTAGCCCGAAAAACAGAGTTTCAGTGCTTCAAAACTTAAGAGTTTACTTTGTCAACTTATTTTAAAGCTCGGCTTTATTAATGGCTTTGATTTGTAAAATAAAGATATCAGGTAAATGattttattatccaactgcatCCATTATAGTACGAATAACGCGCGAAACGCTTAGAAAATTCCACAGTTACTCCTGGAGACCCACCCAACTCAGTTCAAAGTCAGGATTTTTGGAATAAAGAGTTACATAATAAACCTCCTTCGCTCACTGTAAATTTTTCCTCGTAAATAGCCGATTTTCTTATGCGCCATTGGCCGCCAAATAACTGTAACAATcgtaattaaaaattttattctCTAATtataattgattaattcattaATTATGGACCTTATTCATTTACtgcgggaggcgcggtggcatAATGGTTAGTGGGCTGGCCGGGTCACTACGTTGTATTTTGGGGCAAGAAGCTTTACTCTCgtagtacctctctccacccaggtgtataaatgggtttaTCGGCGAATTCACTGCAGAGATGAATGATCTTTTCTTGCgcacaacaaaaaaaatattttgtctcACAACTTTATGGCTAGCTATAAAACAACGAATTGTACAGTAGTTGCGAGCACACGCTAAATTATAATCTGCAACAAATGCAAGCTGCTTGGATAAAGGTAGAATAGAAAGCAAATAGATATTCCCCCGTTTAtacacaggtaaccaaagcgtactataaGAGTTTGTAAGGATGTACTATTAGAACTTGTCTGGATTTGGAGtaaagttaagaaaaatatCTCTTACTAACATTGAAAAGCtataataaaacttaaaaccttacctggtgtcacttttttgtctttctagtgctttagaaagccaTAAGCGCAATTTTCGTCTGGAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01753	zf-MYND	MYND finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002893	Domain	Zinc finger, MYND-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10237	DEFORMED EPIDERMAL AUTOREGULATORY FACTOR 1 HOMOLOG SUPPRESSIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan