Gene detail

Detailed information of KAL9951672.1 in Oculina patagonica

Genomic Location: chr14:21242913...21260637
NR annotation: CAH3167798.1, unnamed protein product, partial [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ACROYT_G044390

ATGGTCATCAGGGAGCTTGCTATTAATTTAGCAAAAGGGCCAAACTGTAAAGTTTACTGTTTTGTCTCACATACTGATTCCTCGGATATGGAAGATGCTATAAGGAATGGAGTAAATTTAATATCTGCTACGCCAAGACCAGGTCTAGACCCCTTAGACTGGTTGAAATTTCCACCACCAGAAATTCCACATACAGATATTGTGGTAGGGCATGGACGAAAGCTAGGCTCAGCAGCCTATTTCATGAAATTCAGCACAGATTGCAAGTGGATCCAATTTGTTAATGATCCTTCTGAAGGCCTTGGTAAGTATAAAGTTATTGAATTCCCTACACGAGATGTAAGTCATGTGCAGGATACAGAATTATGCAAAGCAGCAGATAAAGTTGTTGCTGTTGGTCCTCTACTGCAAGAAATGTACCAGAAAAGTCTTCCAGATATAAAGGTAGAGGTAATCACACCCGGGATTTTGGAAGAGTTCTCCAGTCACTTAACACAGCAGCAAGAAAAGGCATATGTGTTAAATGTCTTTGTCTTTGGTGGAGGTCTTGAAGATCTTGAGATTAAAGGGTACGATATTATTGGAAATGCCATTGCTGCCCTTGGAGAGAAATTTGTGCTGTATTTTGCTGGCTCATCTCCAGGTCAACATGAAGCAATTATGCTCTGGTTCCAGAAAAAAACAAAAATAACAACAAAGCAATTAACAGTACGTGGTTACCGTACTCAGAATGACTTTAAAGACATGCTGAGTGAAGCTGATGTGGTTGCATTGCCATCAAGGACGGAAGGGTTTGGAATGATTGCCCTAGGAGCTTTGTCTGCTGGTGTCCCTGTTCTGGTTTCCAATCAATCTGGAATTGCTAAAGCTCTTGAGAATGTAAATGGTGGAGATTTGGTGGTCGTTAATCCTGGAAATGCAAAAGAATGGGCTGAGAAAATCCAAAAGCTGTCCAAACAAACTAGAGAAGAACGACTGAACGATGCAAAGCTTCTCAGAGAGAACTACCGCAAGACCTACAGTTGGAGCACTCAGTGCAAAATATTTGAAAGGATGATTCAAGATTTGGTGGAAGGGCCACCTTCTTTTAATAGTACCAGTGGGGAGATCATCGAGAGACAGTTTCAGATGCCACCCAGGATATTTGGAGCACTGTTTGGATCAGAAGATGGCAGTGAACAGGAGACAGAGAGCATTGCATCGGAGGTATGCAAAATGTCTAAAGAAACTCCTAACTCAAGTGACACTGGTTTCGATGAAGAAATGGATATCAATTATACTGCTAGAGCAATGGATATTAGCTGTAATGAAGAAACCGTTGATCCAAGACAGTCTGTGGTCACAGAAAAGCAGCTGTCTGACTTAAGTGATGACATAGCAACTTGTTGGCAAAAATTAGGACGAAAGCTTGGGATAGAGGCATCAACGATTTGCAATTTAGATGAGGAGTACAGAAGTGATTATGACAAAGCTAATGCTCTCCTTATCATGTGGAAGGAACAGCATGGGAGTGGTGGGCTTGCAGGACTTCTTGCAGATGCTTTAGAGAGCATTGGAAGAAAAAGCATTGCAGAAAAGCTACTTGAGATGAGTGAAATTCAGATATTTGAAAACAAGTCACTGCACCTTTCTGCATTGGGTGGAAATATTGCTAGTATTGAGAAATTGTTGTCTCAAGGATGTGATATCAATGCAAGAGAAAGCGACGAAAAGACACCCCTGATGATTGCGGCATGTCATGGTAAAGCCAAAGTTGTGAGCTTTCTTCTTAAGAGTGGAGCAGATGCATTTCTGAAAAGCGAGGATGGAAGCACATTGCTTCACTTTGCCTCCCGGGGTGGTAATGTCACCATCATCGAGGAAGTGGTGAAACAGGGGCTTCACATTGATTCGACTGACAGTGTTGATAACACACCATTAATGTATGCAGCCATGGATGGCAGGATACAAGTTGTGAACTGTCTTTTAAAGCTTGGGGCAGACCCGTTTCTGAAAGGAAGGTATGGCAGGAATTCTCTGCACTGGGCTTCAATTAGCGGAAATATCCATGTCATAGAAGTTTTCCTATCTCATGGTGTGGAGGTTGATTCGAGAGATTGGTCTGGAAAGACCCCACTGATGTATGCAGCTAGTTTAGGCAAGGAGGAGGCTGTAACCTATCTTCTGCATAAGGGAGCAAATCCTTTATTGGAAAGCAACCTCAGACAAAATTTGCTTCACTTCAGTTTACAGGGTGGTAGCTTAACCATCATAAATGCAATGCTGTCTCACGGTGTTGATATTCCCAATCATCCTTGCATGTCAGTCACCAATGATCCTTGTTCAAGTGTTGAATGA

Transcript

rna-ACROYT_G044390.t0

ATGGTCATCAGGGAGCTTGCTATTAATTTAGCAAAAGGGCCAAACTGTAAAGTTTACTGTTTTGTCTCACATACTGATTCCTCGGATATGGAAGATGCTATAAGGAATGGAGTAAATTTAATATCTGCTACGCCAAGACCAGGTCTAGACCCCTTAGACTGGTTGAAATTTCCACCACCAGAAATTCCACATACAGATATTGTGGTAGGGCATGGACGAAAGCTAGGCTCAGCAGCCTATTTCATGAAATTCAGCACAGATTGCAAGTGGATCCAATTTGTTAATGATCCTTCTGAAGGCCTTGGTAAGTATAAAGTTATTGAATTCCCTACACGAGATGTAAGTCATGTGCAGGATACAGAATTATGCAAAGCAGCAGATAAAGTTGTTGCTGTTGGTCCTCTACTGCAAGAAATGTACCAGAAAAGTCTTCCAGATATAAAGGTAGAGGTAATCACACCCGGGATTTTGGAAGAGTTCTCCAGTCACTTAACACAGCAGCAAGAAAAGGCATATGTGTTAAATGTCTTTGTCTTTGGTGGAGGTCTTGAAGATCTTGAGATTAAAGGGTACGATATTATTGGAAATGCCATTGCTGCCCTTGGAGAGAAATTTGTGCTGTATTTTGCTGGCTCATCTCCAGGTCAACATGAAGCAATTATGCTCTGGttccagaaaaaaacaaaaataacaacaaagcaATTAACAGTACGTGGTTACCGTACTCAGAATGACTTTAAAGACATGCTGAGTGAAGCTGATGTGGTTGCATTGCCATCAAGGACGGAAGGGTTTGGAATGATTGCCCTAGGAGCTTTGTCTGCTGGTGTCCCTGTTCTGGTTTCCAATCAATCTGGAATTGCTAAAGCTCTTGAGAATGTAAATGGTGGAGATTTGGTGGTCGTTAATCCTGGAAATGCAAAAGAATGGGCTGAGAAAATCCAAAAGCTGTCCAAACAAACTAGAGAAGAACGACTGAACGATGCAAAGCTTCTCAGAGAGAACTACCGCAAGACCTACAGTTGGAGCactcagtgcaaaatatttGAAAGGATGATTCAAGATTTGGTGGAAGGGCCACCTTCTTTTAATAGTACCAGTGGGGAGATCATCGAGAGACAGTTTCAGATGCCACCCAGGATATTTGGAGCACTGTTTGGATCAGAAGATGGCAGTGAACAGGAGACAGAGAGCATTGCATCGGAGGTATGCAAAATGTCTAAAGAAACTCCTAACTCAAGTGACACTGGTTTCGATGAAGAAATGGATATCAATTATACTGCTAGAGCAATGGATATTAGCTGTAATGAAGAAACCGTTGATCCAAGACAGTCTGTGGTCACAGAAAAGCAGCTGTCTGACTTAAGTGATGACATAGCAACTTGTTGGCAAAAATTAGGACGAAAGCTTGGGATAGAGGCATCAACGATTTGCAATTTAGATGAGGAGTACAGAAGTGATTATGACAAAGCTAATGCTCTCCTTATCATGTGGAAGGAACAGCATGGGAGTGGTGGGCTTGCAGGACTTCTTGCAGATGCTTTAGAGAGCATTGGAAGAAAAAGCATTGCAGAAAAGCTACTTGAGATGAGTGAAATTCAGATATTTGAAAACAAGTCACTGCACCTTTCTGCATTGGGTGGAAATATTGCTAGTATTGAGAAATTGTTGTCTCAAGGATGTGATATCAATGCAAGAGAAAGCGACGAAAAGACACCCCTGATGATTGCGGCATGTCATGGTAAAGCCAAAGTTGTGAGCTTTCTTCTTAAGAGTGGAGCAGATGCATTTCTGAAAAGCGAGGATGGAAGCACATTGCTTCACTTTGCCTCCCGGGGTGGTAATGTCACCATCATCGAGGAAGTGGTGAAACAGGGGCTTCACATTGATTCGACTGACAGTGTTGATAACACACCATTAATGTATGCAGCCATGGATGGCAGGATACAAGTTGTGAACTGTCTTTTAAAGCTTGGGGCAGACCCGTTTCTGAAAGGAAGGTATGGCAGGAATTCTCTGCACTGGGCTTCAATTAGCGGAAATATCCATGTCATAGAAGTTTTCCTATCTCATGGTGTGGAGGTTGATTCGAGAGATTGGTCTGGAAAGACCCCACTGATGTATGCAGCTAGTTTAGGCAAGGAGGAGGCTGTAACCTATCTTCTGCATAAGGGAGCAAATCCTTTATTGGAAAGCAACCTCAGACAAAATTTGCTTCACTTCAGTTTACAGGGTGGTAGCTTAACCATCATAAATGCAATGCTGTCTCACGGTGTTGATATTCCCAATCATCCTTGCATGTCAGTCACCAATGATCcttgttcaagtgttgaatga

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF20706	GT4-conflict	Family 4 Glycosyltransferase in conflict systems	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24178	MOLTING PROTEIN MLT-4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0097543	Cellular Component	ciliary inversin compartment	Interproscan
GO:1904108	Biological Process	protein localization to ciliary inversin compartment	Interproscan