Detailed information of KAL9952386.1 in Oculina patagonica

Genomic Location: chr13:4603528...4614096
NR annotation: XP_020618141.1, protein Smaug homolog 1-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0IHW3Protein Smaug homolog 1 OS=Xenopus tropicalis OX=8364 GN=samd4a PE=2 SV=1
Q5FWP2Protein Smaug homolog 1 OS=Xenopus laevis OX=8355 GN=samd4a PE=2 SV=1
B5DF21Protein Smaug homolog 1 OS=Rattus norvegicus OX=10116 GN=Samd4a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037093Homologous_superfamilySmaug, PHAT domain superfamilyInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR037634DomainProtein Smaug, SAM domainInterproscan
IPR050897FamilySMAUG/VTS1 RNA-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12515STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0030371Molecular Functiontranslation repressor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0043488Biological Processregulation of mRNA stabilityInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan

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