Gene detail

Detailed information of KAL9952412.1 in Oculina patagonica

Genomic Location: chr13:4763945...4798333
NR annotation: XP_020618137.1, histamine H2 receptor-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G039662.t0

CTTAAAACAGGCAGAGTTAGTTAATGCAGCAGTTAGCGTGCATCTGGCAGATGTTGTGGGGTTGAATGTCAGCGCAGACGATCTTAAAAGTTTTGCTAAAGGTTTGATTTCTTGCACCGAAATAACTCTTCGTGGACAAACAGTTTGCGGTCAAAACTCGCTGATGGTCGCTCTAGACGTTTAGACGGGTTGGAACCCTGCAGCTCACTAAAGCCACGAAAAATAACAAAGTCTAGCCAGGTGTAGGCGGAAGTAACACTGATAAATTTCCGCGTCTGTTTCTTCTGTTGTCAGCCAACACCTTGTTTCGAGCTCACAGGATTGTGTCAGACAAaagcatcgtgaattgatcAAACATCAGCCAGGAAAGTCCATAATTCGCCCAAAATGAGTCTGGAAAACAACACGGAGACACAACTGACTAGGAATTCGTCCACCTATCTGAGTCAAATGACAAATATCGAGCTAGGGATAGTGGTCGCGCTCTATGTGCTACTGTTGTTGGCCATAATAACTGGAAATGGACTCGTTCTATCGGCATTTTCCATCAACAAACGCCTGCGGACAGCAACCAACACGCTGATAATGGGCCTAGCAGTAAGCGATATTCTTGTAGGCTTTGTATCTATTCCCTGCTGGTTGAACATTTTCACATCATATCACAAGCAATCCCCCATCAGCCCGACTTCGTATCAGTTCTACATTACGTTTGATATCTTCATCGGCGGAGCCTCCATTCTTCAACTTACAGCGCTCAGCATGGAACGGTGTCACGCAATCGTCCGACCGTTACGTCACAGAACGCTCTCCATGAAAGTGTATTACGTCATGATCGCGATACCCTGGCTGTACGCCGCGGTGGTGGCAAGTTTACAACCCGTGCAGTTTCACCGTTGGCAAGAGGTTTATACGCTTCTCGTGGCGACCACATGCTTCTTCGTtccttttattatcattttcttCGCTTATTTATCCATCTACCGTTTCGCTCGCTCCCAGCCGGGAAGACGGAAAATTTCCAAGCATCGAGCTGTGAGACAAGCTTTTAAAAAGGATCTTAAACTGTCTGTCACGCTGGCTTTCATCACAGGGCTTTTTGTCGTCGCCTGGCTCCCGCTATTCGTCGTGACCATGATCGGGACGTATTACCCACAATACCTCCCTCCAACCCGAGGGACGGATCGCGTGCTTCAGCTTGTCAAGTTCTGTCACTATAGCAACAGCGCGCTCAACCCAGTCGTGTACGCTTTCCGGAACAGCGAGATGATTGCAACCTTCCGCTATATTGCGCGTCGTCTGCTTTGCAAAGTAAGCCGAGAGCCTTTATCTAGAAGCTCGTCTTTCAAATCAAGCACAAGAAGGTCGTTGCAGACCAGTTTAAAGAGATCTTCCTCCCTGAAGGGTGGAAGCAACAGAGAACATAATGTAAACAAAGAAGAAATTGACAGAAACTGTAACTGTGCAAAGAAAAGCGAGACAATGGTGTTCATGCATTCAACTGTTTAGCTCTAAGCTGAATAGGAGTTTAAGTCAACGgaaactagggctttccacaagttgctcggcaactttttggcaacttttcatgtttcgagcaacttttttcccttcgagcaactttttttccactcgagcaacttgttgcattttgaacaatttccagaccgaagatatccgaagattatccgaatgttgtttaaaggccaaacgaccgtttccgaagatttacgaagtttggcGAAGATTTTCTAGAAACGTCTGAAGACcctcggctcattctgcattaaaacattccaaaaaaatcctcggcaaacatgacgtcatcactttacAAATTCTCCCTTTGATATTTTATTTAGGTCCTTCTTTTGCTGTAacattgcataaaactgcttagaaatcttttttttgtttagaaatgtaaCCCTCAAatggaaattagcatatatttaaagaaattatcttgattagaagcagcgttttggattttttggagcaactttcgagcaacttttaatatcagaagcaacttttttggagttttggagcaacttttgagcaactttttgagaaatttcgggcaactttttgagaaatctcgagcaacttatGGAAAGCCCTAACGGAAACCACAGTAACGATGGCAACAAGAACGAACCGACACAAAcgctttaaagggactgtgtcacggattttaccagatttttaaacagccaaaatttatatttgtgtcgcaggaaacccaaaaataatagtccattttttattaaaaattttgatATTAGAGcaatgaaactgttaacgagcatctttggctgcggatggctcggatggaaatggattgcaccTTATAAAAGTTAGGCTAACGTTTTAAAGTTGTTCCGCGCGTCAGCCAAAAAATCTATATTCATAGCCGTAGGTTGATTTCTAATCACAAATAAAGGTTAAATCTTCCTTTGGATTTTCAAAGACATTGTTTTTtgtgggttaagttgcctaccactaatttcagaataGATTACACCAAAaatc

Protein

Uniprot

Uniprot term	Description
Q28997	Beta-2 adrenergic receptor OS=Sus scrofa OX=9823 GN=ADRB2 PE=2 SV=2
P11616	Adenosine receptor A1 OS=Canis lupus familiaris OX=9615 GN=ADORA1 PE=2 SV=1
Q60612	Adenosine receptor A1 OS=Mus musculus OX=10090 GN=Adora1 PE=2 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24246	OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04150	HRH2; histamine receptor H2	-	G protein-coupled receptors	ko04030	deepkoala