Gene detail

Detailed information of KAL9952815.1 in Oculina patagonica

Genomic Location: chr13:9867281...9870988
NR annotation: PFX15637.1, hypothetical protein AWC38_SpisGene20139 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ACROYT_G040126

ATGGATATCGAAAAATTCAGAGAGAATCAGAAGAAGCATTATGAGAATAATCTTTTGAAAAGACAAATCAGAAAACAAATAAAAGACACACTGGATGAAAAACAATCAAGACAATTTGAAAGCAAGGAATTATTCAAACCCGTTATAACATCTCAGAAAGAGGTGAAAGAAACCATCGATAAAAAACAAGATAAATTAATTGAAAACTTGAATGAAAAACAAGAAAAATTAATTTCAGCTGTTGATATGTTGAATGAAACAATGTCATCATCTGGTTCACAAAGTGGGGTTCAAAGTTGGTTAAGTGATTTACCATCAAAATTTGATCCTTTAGACATAGTACCTGAAGAAAATGAAGAAGAAGATGAAGATGAAGAAGTCCCAAAAAAAGAAGTCGTTGAAGAACATATCTTCAACCAAGGTGAAAAAAACATCATAAGAAAATATGGATTTGATCCTGATTTGAATGATATTCCAGATGTAAAAGAAGTTAGATCAGCAATATCTCATCTTACTGGAAAAAGACGATCTTCAAATCGGATTATTAAAAATAACGCAAGGAAAGATCAAGAGATATTGAGTAAATATCGCACTGTTATAAAAGGAATCAATTTGAGGGAAAAAAAAGGTGAAGGTATCAGGTCTTACAAACGGCCGAAGCGGAATGCTTACAAGATAAACAATGGACAGTATGGTGGTTTACTCATAAATATGCCAAGATTAATCAATGAAATGGTCATCGAAGCCGTGAAAGATGGCAAAATGGTTTATGAAGACATTGCTGACAAATCACTCGTTGATCTCATCACAAAGAGGTTTAATCCGAAGAAAAAGTATTCATCAAAAGCAATCAAAATATTCAATAATCTCAATATGTTATCAAACATCCCAAAACACAGATCATCAGGGAAATCAAAACTGATTGGAGGTGCAATCATATACTCAAACCCAAACGATTTGATGAAAAGATTGACTTTGTTGACTGGAAGCAAAAGGGCTGGTAATACAAGTATTGCTCTCAGAAATGAAATGTGGCAGATCATTGATTATTTACTCAAACAAGGTGTGATAGCTAAAACACAATACGATAAATTTGTCAGGACTCAATTAATAAGTTCGAAATATTGCAAACGATACGAATATGTCTCATTTGATTTACAAAATCCAATAACATTACCTGCAAACAACCAGTCTCAAAAAAAGAGTGGATACAGGTTCGTTATTGATAGCAGTAGTGAGACTCACCCTTTCGACTTGTATAATTCATACCTTTCTGTTGATTTTAAAATCACAAAGATGGATAACACTGGATATAATGCAGATGATCAGGTTGCAACCGTCAATTCCGGTTATTCACTTATCAATCAGTTGAAGGTTGAATTAAGCGGAGTTAATGCTCTCGGTGCACCAGGGGTTAATCATGCTATCAATGTGAAAAATCTGACTGAATTATCATCAAGTTACACTGAAACAGTCGGACCAAGTATGTTCAATTACCCAGACACTAGTGTCGGTGCTGTATCAGAAAAATATACTATGAGAGAAGTACAGCACGGTCGAAACGACGCTGATAATGCTTATGAAGCAAGAAATGTAGTTGATGGAGATAATGTAAACTACAATGAGGGTTTCGCAAAAAGAAAAGCATTACTTACAGCATCCGCTGAAAATAACATCGTACTACCATTGAACAGATATGGTTTCTTCAACTCTTTTGAGACAGAAATAGCACCGAATGGTAAAGTCACCATTGATGTCAGTCTTGAAACTGATAACAATGTGATATTTCGTGCTGGGGGTGACCCAGGAAGGTTTATTGTCACTAGGCTTGTTTTATGGGTACCGAAAATGATATTCAATGCTGAGGGTGAGCAGATTTTTCTTAAAACATATCTAAAGCCACATACATGGTCATATCTCAAAGAGAGAATTGAGATTTCTCCATCAACAACAGCACGTCAAGGTACATTCAGGATTACTTCTTCAATTCGAAAACCGAGGCATGTTTTTATATGGGCTCTTAATGATGCAAAAATGAATGATCAAACACAAAATCCATTTCTATTTAATACATATAACATCGCGAATAACCGAACATTTTCAAATGCAAGGCTTGAACTGAGCAACGGTATTTTTTATCCAAACGAAGAACTGAAACCAGATACAGAGATCGTACAAGCATACAGGACATTGATGGAATATCAAAAAGATTTTAATGCTTATTACAGTTCTCCAACAATAACACTGAAATCATTTCAAGAGTTGTATGGGCTCATCTATTTTGATCTTAGAAACCAAGAGGAAGAAATCAAAAGTGGTTCAACCAAGATCCAATTCATTTACAATTTATCTGGGAATCCAAATGCAAATTACAGCCTCTATGCTTTGATTCTCCATGAAGAAGAGCTTAGTGTTGATATCGTCAATGGTAAAGTTCTCCTCAAAGCTTGA

Transcript

rna-ACROYT_G040126.t0

ATGGATATCGAAAAATTCAGAGAGAATCAGAAGAAGCATTATGAGAATAATCTTTTGAAAAGACaaatcagaaaacaaataaaagacacACTGGATGAAAAACAATCAAGACAATTTGAAAGCAAGGAATTATTCAAACCCGTTATAACATCTCAGAAAGAGGTGAAAGAAACCATCgataaaaaacaagataaattaattgaaaacttgaatgaaaaacaagaaaaattaatttcagcTGTTGATATGTTGAATGAAACAATGTCATCATCTGGTTCACAAAGTGGGGTTCAAAGTTGGTTAAGTGATTTACCATCAAAATTTGATCCTTTAGACATAGTAcctgaagaaaatgaagaagaagatgaagatgaagaagtCCCAAAAAAAGAAGTCGTTGAAGAACATATCTTCAACCAAGGTGAAAAAAACATCATAAGAAAATATGGATTTGATCCTGATTTGAATGATATTCCAGATGTAAAAGAAGTTAGATCAGCAATATCTCATCTTACTGGAAAAAGACGATCTTCAAATCGgattattaaaaataacgcAAGGAAAGATCAAGAGATATTGAGTAAATATCGCACTGTTATAAAAGGAATCAATTTGAGGGAAAAAAAAGGTGAAGGTATCAGGTCTTACAAACGGCCGAAGCGGAATGCTTACAAGATAAACAATGGACAGTATGGTGGTTTACTCATAAATATGCCAAGATTAATCAATGAAATGGTCATCGAAGCCGTGAAAGATGGCAAAATGGTTTATGAAGACATTGCTGACAAATCACTCGTTGATCTCATCACAAAGAGGTTTAATCCGAAGAAAAAGTATTCATCAAAagcaatcaaaatattcaataatCTCAATATGTTATCAAACATCCCAAAACACAGATCATCAGGGAAATCAAAACTGATTGGAGGTGCAATCATATACTCAAACCCAAACGATTTGATGAAAAGATTGACTTTGTTGACTGGAAGCAAAAGGGCTGGTAATACAAGTATTGCTCTCAGAAATGAAATGTGGCAGATCATTGATTATTTACTCAAACAAGGTGTGATAGCTAAAACACAATACGATAAATTTGTCAGGACTCAATTAATAAGTTCGAAATATTGCAAACGATACGAATATGTCTCATTTGATTTACAAAATCCAATAACATTACCTGCAAACAACCAGTCTCAAAAAAAGAGTGGATACAGGTTCGTTATTGATAGCAGTAGTGAGACTCACCCTTTCGACTTGTATAATTCATACCTTTCTgttgattttaaaatcacaaagatGGATAACACTGGATATAATGCAGATGATCAGGTTGCAACCGTCAATTCCGGTTATTCACTTATCAATCAGTTGAAGGTTGAATTAAGCGGAGTTAATGCTCTCGGTGCACCAGGGGTTAATCATGCTATCAATGTGAAAAATCTGACTGAATTATCATCAAGTTACACTGAAACAGTCGGACCAAGTATGTTCAATTACCCAGACACTAGTGTCGGTGCTGTATCAGAAAAATATACTATGAGAGAAGTACAGCACGGTCGAAACGACGCTGATAATGCTTATGAAGCAAGAAATGTAGTTGATGGAGATAATGTAAACTACAATGAGGGTTTCgcaaaaagaaaagcattaCTTACAGCATCCGCTGAAAATAACATCGTACTACCATTGAACAGATATGGTTTCTTCAACTCTTTTGAGACAGAAATAGCACCGAATGGTAAAGTCACCATTGATGTCAGTCTTGAAACTGATAACAATGTGATATTTCGTGCTGGGGGTGACCCAGGAAGGTTTATTGTCACTAGGCTTGTTTTATGGGTACCGAAAATGATATTCAATGCTGAGGGTGAGCAGATTTTTCTTAAAACATATCTAAAGCCACATACATGGTCATATCTCAAAGAGAGAATTGAGATTTCTCCATCAACAACAGCACGTCAAGGTACATTCAGGATTACTTCTTCAATTCGAAAACCGAGGCATGTTTTTATATGGGCTCTTAATGATGCAAAAATGAATGATCAAACACAAAATCCAtttctatttaatacatataaCATCGCGAATAACCGAACATTTTCAAATGCAAGGCTTGAACTGAGCAACGGTATTTTTTATCCAAACGAAGAACTGAAACCAGATACAGAGATCGTACAAGCATACAGGACATTGATGGAATATCAAAAAGATTTTAATGCTTATTACAGTTCTCCAACAATAACACTGAAATCATTTCAAGAGTTGTATGGGCTCATCTATTTTGATCTTAGAAACCAAGAGGAAGAAATCAAAAGTGGTTCAACCAAGATCCAATTCATTTACAATTTATCTGGGaatccaaatgcaaattacagcCTCTATGCTTTGATTCTCCATGAAGAAGAGCTTAGTGTTGATATCGTCAATGGTAAAGTTCTCCTCAAAGCTTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21738	DJR_capsid	Double jelly roll capsid-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049512	Domain	Double jelly roll-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36159	PROTEIN CBG23766	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19840	BEM3; Rho-type GTPase-activating protein	-	MAPK signaling pathway - yeast	ko04011	deepkoala