Detailed information of KAL9953429.1 in Oculina patagonica

Genomic Location: chr13:18550666...18559973
NR annotation: KAJ7370668.1, hypothetical protein OS493_030783 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR050149FamilyCollagen superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006910Biological Processphagocytosis, recognitionInterproscan
GO:0030169Molecular Functionlow-density lipoprotein particle bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0038187Molecular Functionpattern recognition receptor activityInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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