Detailed information of KAL9953529.1 in Oculina patagonica

Genomic Location: chr13:19928228...19934731
NR annotation: XP_015759312.1, PREDICTED: uncharacterized protein LOC107338580 isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
D4A7U2Calcium-responsive transcription factor OS=Rattus norvegicus OX=10116 GN=Carf PE=1 SV=1
Q8VHI4Calcium-responsive transcription factor OS=Mus musculus OX=10090 GN=Carf PE=2 SV=1
Q8N187Calcium-responsive transcription factor OS=Homo sapiens OX=9606 GN=CARF PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF04434SWIMSWIM zinc fingerDomainInterproscan
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029309FamilyCalcium-responsive transcription factorInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan

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