Gene detail

Detailed information of KAL9953641.1 in Oculina patagonica

Genomic Location: chr13:21572763...21576195
NR annotation: XP_020605848.1, cartilage intermediate layer protein 1-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O15394	Neural cell adhesion molecule 2 OS=Homo sapiens OX=9606 GN=NCAM2 PE=1 SV=2
O35136	Neural cell adhesion molecule 2 OS=Mus musculus OX=10090 GN=Ncam2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10591	SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR019577	Domain	SPARC/Testican, calcium-binding domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR039675	Family	Cartilage intermediate layer protein 1/2	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15031	CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan