Genomic Location: chr13:23386536...23408714
NR annotation: KAJ7365564.1, TNF receptor-associated factor 3 [Desmophyllum pertusum]
| CDS | ||||
| ACROYT_G041284 | ||||
| Transcript |
| rna-ACROYT_G041284.t0 |
| Protein |
| KAL9953817.1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q60803 | TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN=Traf3 PE=1 SV=2 | |||
| Q13114 | TNF receptor-associated factor 3 OS=Homo sapiens OX=9606 GN=TRAF3 PE=1 SV=2 | |||
| P70191 | TNF receptor-associated factor 5 OS=Mus musculus OX=10090 GN=Traf5 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Ubiquitin Family | E3|E3 activity RING|U-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21355 | TRAF-mep_MATH | TRAF/meprin, MATH domain | Domain | Interproscan |
| PF21363 | TRAF3_RING | TNF receptor-associated factor 2/3/5, RING domain | Domain | Interproscan |
| PF02176 | zf-TRAF | TRAF-type zinc finger | Family | Interproscan |
| PF13385 | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF00059 | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008974 | Homologous_superfamily | TRAF-like | Interproscan |
| IPR001293 | Domain | Zinc finger, TRAF-type | Interproscan |
| IPR049342 | Domain | TRAF1-6/MEP1A/B-like, MATH domain | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR003609 | Domain | PAN/Apple domain | Interproscan |
| IPR049440 | Domain | TNF receptor-associated factor 3/5, RING domain | Interproscan |
| IPR001304 | Domain | C-type lectin-like | Interproscan |
| IPR018378 | Conserved_site | C-type lectin, conserved site | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR002083 | Domain | MATH/TRAF domain | Interproscan |
| IPR016186 | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10131 | TNF RECEPTOR ASSOCIATED FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0033209 | Biological Process | tumor necrosis factor-mediated signaling pathway | Interproscan |
| GO:0070534 | Biological Process | protein K63-linked ubiquitination | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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