Detailed information of KAL9954009.1 in Oculina patagonica

Genomic Location: chr13:25631949...25714768
NR annotation: XP_027055638.1, fibrillin-1-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8TER0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNED1 PE=1 SV=2
Q70E20Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sned1 PE=2 SV=2
Q5ZQU0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Sned1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06119NIDONidogen-likeFamilyInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF07474G2FG2F domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR036280Homologous_superfamilyMultiheme cytochrome superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR003886DomainNIDO domainInterproscan
IPR006605DomainG2 nidogen/fibulin G2FInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR003645DomainFollistatin-like, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan

TOP