Gene detail

Detailed information of KAL9954443.1 in Oculina patagonica

Genomic Location: chr13:31308134...31308796
NR annotation: XP_020603033.1, histone H1-delta-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P15870	Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
P02258	Histone H5 OS=Anser anser anser OX=8844 PE=1 SV=1
P06513	Histone H5 OS=Cairina moschata OX=8855 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00538	Linker_histone	linker histone H1 and H5 family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005818	Domain	Linker histone H1/H5, domain H15	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR005819	Family	Linker histone H1/H5	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11467	HISTONE H1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006334	Biological Process	nucleosome assembly	Interproscan
GO:0030527	Molecular Function	structural constituent of chromatin	Interproscan
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0030261	Biological Process	chromosome condensation	Interproscan
GO:0031492	Molecular Function	nucleosomal DNA binding	Interproscan
GO:0045910	Biological Process	negative regulation of DNA recombination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11275	H1_5; histone H1/5	-	Chromosome and associated proteins	ko03036	deepkoala