Detailed information of KAL9954671.1 in Oculina patagonica

Genomic Location: chr13:33899213...33901075
NR annotation: XP_020612191.1, TNF receptor-associated factor 5-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q99PQ2E3 ubiquitin-protein ligase TRIM11 OS=Mus musculus OX=10090 GN=Trim11 PE=1 SV=1
B1H278E3 ubiquitin-protein ligase TRIM11 OS=Rattus norvegicus OX=10116 GN=Trim11 PE=2 SV=1
A0JN74E3 ubiquitin-protein ligase TRIM11 OS=Bos taurus OX=9913 GN=TRIM11 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16282RHA2; E3 ubiquitin-protein ligase RHA2EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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