Gene detail

Detailed information of KAL9954729.1 in Oculina patagonica

Genomic Location: chr13:34603553...34608819
NR annotation: XP_020612176.1, TNF receptor-associated factor 5-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6DJN2	TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1
Q28DL4	TNF receptor-associated factor 6 OS=Xenopus tropicalis OX=8364 GN=traf6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005164	Molecular Function	tumor necrosis factor receptor binding	Interproscan
GO:0009898	Cellular Component	cytoplasmic side of plasma membrane	Interproscan
GO:0033209	Biological Process	tumor necrosis factor-mediated signaling pathway	Interproscan
GO:0070534	Biological Process	protein K63-linked ubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05448	VEGFA; vascular endothelial growth factor A	-	Glycosaminoglycan binding proteins	ko00536	deepkoala