Detailed information of KAL9954919.1 in Oculina patagonica

Genomic Location: chr13:36708378...36769012
NR annotation: XP_020603508.1, Fanconi anemia group M protein-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BGE5Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3
Q8IYD8Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2
A0A1D5PRR9Fanconi anemia group M protein OS=Gallus gallus OX=9031 GN=FANCM PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15020CATSPERDCation channel sperm-associated protein subunit deltaFamilyInterproscan
PF02732ERCC4ERCC4 domainDomainInterproscan
PF16783FANCM-MHF_bdFANCM to MHF binding domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028751FamilyCation channel sperm-associated auxiliary subunit delta/epsilonInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR006166DomainERCC4 domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR047418DomainFanconi anemia group M protein, XPF-like nuclease domainInterproscan
IPR031879DomainFanconi anemia group M protein, MHF binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR044749DomainFANCM, DEAH-box helicase domainInterproscan
IPR039686DomainFANCM/Mph1-like, insert domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14025FANCONI ANEMIA GROUP M FANCM FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0036128Cellular ComponentCatSper complexInterproscan
GO:0000400Molecular Functionfour-way junction DNA bindingInterproscan
GO:0009378Molecular Functionfour-way junction helicase activityInterproscan
GO:0036297Biological Processinterstrand cross-link repairInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0045003Biological Processdouble-strand break repair via synthesis-dependent strand annealingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

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