Gene detail

Detailed information of KAL9955270.1 in Oculina patagonica

Genomic Location: chr12:2291345...2293655
NR annotation: KAJ7369968.1, hypothetical protein OS493_035139 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G036569.t0

GAGCGTCAATTGAGGGGCAATTGAGTTCAGCTAGCTTTTGCCTAGCTATGATTCGCCTCAATCCGTTTCCTGTTCTTCTAAATAACCTCAGCAATGAACTGGATGACAGGAATCTACAGAGCCTTATACATGTTTGTGGAGATTACATTCCCGGTGGCCAACGAGAAAGAATAAGAAGTGGTTGGGATGTATTTAACATTTTACTGCGACAAAACGTAATCGGTGGAAGCGAACCGGAAAAGATGGCGAACttgcttttaattttcaagGAATTAAGGCCCAGAAGAAGAGATTTAGTTCACATGATTAAACAGCACATTCGAGAACACTGCGATCAACCAGACTTCATTTTAAAGCTTGACTCATCAGCGGCCAGTTCAACGGCAAGTTTCGCGGAAATCATCAGCCGGAATAGTTCGATCAATAATGAGCTGCGGAGGTCCTCTTCTCAATGTTGTGGGCTTCATTGCTGTTGTTTTACTTGCAACTGCAATCGCTGCAATTCATGCTGTGGTCTGCCCTGTTGCTGTGTTATTTTAGCCgtactttttacctttttcaccaTCATAGCTTCATTGGCCTGGTATGCCGATATTCCCAAAGTCAGCTCTTATTTGCGTTCGAACGATGATCTGCTTAAGACCGGACCGTATGTTATTGGTTTTCTGGGAGGATTTGCACTGACTGCTCTGTGTGCGTATATATACATCAGATGTGCATGTGTTAGGCAAAGGAATAACCGAAATTACGCAGTAATCCCAAGCACAGAGAACAACAGTAACATACAATCACAGCGCGTCGCTGAACCGGTGCCGACACTAACCTCGCGTGCTCACCCCGGACCCCCTGACTCGCCGATCACGGATTTAAGTTCGATTGTGTCCGAGTGTGAGACAGCTCCAGACGGTTTGCAGCAGGACAACTTTATGGTAGCGTTTCCCAAGGAAACGGGTCAAGAAGAAGAACTGTTTTTTACTCCAAAGGAGAGACCAGGAGAAAAGGAATTAGAGAAAGTGTTTGATAACAAATAAGATTGTATAAAACTGAACATTGTCTGCTGTGCGTCATCTTGATTTGAAAGTTGAACCCACTGAAACAGAAAAAgataagggactggtcaataagtatcagggggggtgggccggagcaattggaaaagtggtggctcgaaaatttgtgacccaccccttccgtctggctcaaaactgactaacccacccctgacagggggttgaaaaaatacatgacccaccccctttgctaaaaaaatcaagggacctatcatgtctttatcatctgttaggggttggagattttttatttgacttcagcttttaaagtgaaattccctacatagacattttccctgatggacactgctgttccatatacgtctttttccatttcttaacacaccaaagaaggatgaatttatcacttctcatactagccttttgcaagttttccacatatttgtgtgtaatgttcatggggaaatttagacacaaacatatgcaaaaaactgaatcagtatatgatattaattcataatcaattatagaagaagtatttttatacaggaattaataacataaaatacaaccactgtccatcattcatatttgcaaattgtttgatAAAAGAGTtaactggtattaaaaggcctaaagcccagcgtgaatctatgcaggttgaagagagtcagATAAAACTGACGAtatgattacaagccatctaggggggtcagggggcatgctcccccgggaaatttttatatttgggccttttgaaatcgctagaaattcatttaaaactgcttacatggagaaatttatcaattttatatactgatgaatacaacttttcttggaactataacagttaaaagttagtgaatcaataagatgacccaccccctacgtgtagatcaaaataacataacccaccccttttcgagggctcaaaaactgatgacccaccccctttctgctccggcccaccccccctgtacttattgaccagtccctaaccAGTCCGGTGTAAAGTTTACATAGTGTTCGGTCTAGTTaaccgtagcctgcgtagctggcggtattgttgggtttttaagCGCCCACCAGCAAGCGGCGACGGTAGTTCCTAAACTCGATGACAACTTCGTTGTTTTATAATCCACCTTACACTGCGATGATGCTAGATACCTATTTTAAAGTTCCTCTAATTCCACGAAAGCGGGGATCACTGTCAACTGATGTTCTTCAGAGGGGTGCTAAGGATTGGACCACTTCCTTTTTTGAGGGGAAGGGGGTGG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01335	DED	Death effector domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001875	Domain	Death effector domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan