Detailed information of KAL9955957.1 in Oculina patagonica

Genomic Location: chr12:12029019...12040569
NR annotation: XP_020611984.1, E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6E2N3E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio OX=7955 GN=trim33 PE=2 SV=1
Q924W6Tripartite motif-containing protein 66 OS=Mus musculus OX=10090 GN=Trim66 PE=1 SV=4
O15016Tripartite motif-containing protein 66 OS=Homo sapiens OX=9606 GN=TRIM66 PE=1 SV=5
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF00439BromodomainBromodomainDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001487DomainBromodomainInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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