Detailed information of KAL9957180.1 in Oculina patagonica

Genomic Location: chr12:28812517...28846988
NR annotation: XP_027036017.1, uncharacterized protein LOC113664594 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5
Q7Z443Polycystin-1-like protein 3 OS=Homo sapiens OX=9606 GN=PKD1L3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01822WSCWSC domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF18911PKD_4PKD domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00801PKDPKD domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR000601DomainPKD domainInterproscan
IPR014010DomainREJ domainInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR042060DomainPolycystin-1 like, PLAT/LH2 domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP