Detailed information of KAL9957430.1 in Oculina patagonica

Genomic Location: chr12:31898407...31926404
NR annotation: CAH3137448.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8N201Integrator complex subunit 1 OS=Homo sapiens OX=9606 GN=INTS1 PE=1 SV=2
Q6P4S8Integrator complex subunit 1 OS=Mus musculus OX=10090 GN=Ints1 PE=1 SV=2
Q6PE54Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus OX=10090 GN=Dhx40 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan
IPR038902FamilyIntegrator complex subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21224UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0032039Cellular Componentintegrator complexInterproscan
GO:0034474Biological ProcessU2 snRNA 3'-end processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13138INTS1; integrator complex subunit 1-Spliceosomeko03041deepkoala

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