Genomic Location: chr12:31898407...31926404
NR annotation: CAH3137448.1, unnamed protein product [Pocillopora meandrina]
| CDS | |||||
| ACROYT_G039064 | |||||
| Transcript |
| rna-ACROYT_G039064.t0 |
| Protein |
| KAL9957430.1 |
| Uniprot term | Description |
|---|---|
| Q8N201 | Integrator complex subunit 1 OS=Homo sapiens OX=9606 GN=INTS1 PE=1 SV=2 |
| Q6P4S8 | Integrator complex subunit 1 OS=Mus musculus OX=10090 GN=Ints1 PE=1 SV=2 |
| Q6PE54 | Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus OX=10090 GN=Dhx40 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF21010 | HA2_C | Helicase associated domain (HA2), ratchet-like | Domain | Interproscan |
| PF04408 | HA2_N | Helicase associated domain (HA2), winged-helix | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR007502 | Domain | Helicase-associated domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR002464 | Conserved_site | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | Interproscan |
| IPR048333 | Domain | Helicase associated domain (HA2), winged-helix domain | Interproscan |
| IPR038902 | Family | Integrator complex subunit 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21224 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0032039 | Cellular Component | integrator complex | Interproscan |
| GO:0034474 | Biological Process | U2 snRNA 3'-end processing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13138 | INTS1; integrator complex subunit 1 | - | Spliceosome | ko03041 | deepkoala |