Detailed information of KAL9958575.1 in Oculina patagonica

Genomic Location: chr11:13700394...13783484
NR annotation: PFX25553.1, Fibrinogen C domain-containing protein 1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D8VNT0Ryncolin-4 OS=Cerberus rynchops OX=46267 PE=1 SV=1
Q15485Ficolin-2 OS=Homo sapiens OX=9606 GN=FCN2 PE=1 SV=2
Q9WTS8Ficolin-1 OS=Rattus norvegicus OX=10116 GN=Fcn1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07534TLDTLDDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF00431CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006571DomainTLDc domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR000859DomainCUB domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR000998DomainMAM domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24543MULTICOPPER OXIDASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

TOP