Genomic Location: chr11:14954649...14961342
NR annotation: XP_020603902.1, dermatan-sulfate epimerase-like protein [Orbicella faveolata]
| CDS | ||||
| ACROYT_G035686 | ||||
| Transcript |
| rna-ACROYT_G035686.t0 |
| Protein |
| KAL9958639.1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q8IZU8 | Dermatan-sulfate epimerase-like protein OS=Homo sapiens OX=9606 GN=DSEL PE=1 SV=2 | |||
| Q0VBN2 | Dermatan-sulfate epimerase-like protein OS=Mus musculus OX=10090 GN=Dsel PE=2 SV=1 | |||
| P0C2H4 | Dermatan-sulfate epimerase OS=Bos taurus OX=9913 GN=DSE PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF01436 | NHL | NHL repeat | Repeat | Interproscan |
| PF00643 | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF00630 | Filamin | Filamin/ABP280 repeat | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018957 | Domain | Zinc finger, C3HC4 RING-type | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR000315 | Domain | B-box-type zinc finger | Interproscan |
| IPR014756 | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR001258 | Repeat | NHL repeat | Interproscan |
| IPR017868 | Repeat | Filamin/ABP280 repeat-like | Interproscan |
| IPR003649 | Domain | B-box, C-terminal | Interproscan |
| IPR001298 | Repeat | Filamin/ABP280 repeat | Interproscan |
| IPR008929 | Homologous_superfamily | Chondroitin AC/alginate lyase | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR011042 | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR052447 | Family | Dermatan-Sulfate Isomerase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15532 | - | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0030204 | Biological Process | chondroitin sulfate metabolic process | Interproscan |
| GO:0030205 | Biological Process | dermatan sulfate metabolic process | Interproscan |
| GO:0047757 | Molecular Function | chondroitin-glucuronate 5-epimerase activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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