Gene detail

Detailed information of KAL9959416.1 in Oculina patagonica

Genomic Location: chr10:2192016...2212930
NR annotation: KAJ7377588.1, HemK methyltransferase member 1 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G032739.t0

GCGATGACAAACAGCAAAGAAATAAACTTCACAACAACAGAGCCACATGTAATTTCACGCATGTCGTAAGCAGCTATAATGTTTCATGGTGAAAACATTGCTTCGAAACCGAAAGCCAGCAAATGGCACCTCTCAGAAACTTCACTGCTTGTTTAAATGATTATAGATAGCTTTCAGAAAGTGTTTTCAGCGTCTTAAAGAAAGATCTTCCTGGTTAAACTAGCCCAATATCACATCAACTTCTTCGGACTTCTTGCAACTTGCTACGTCTAGAGAAATTCGATCCAGTTTTCCGCTTTCAAGTCGCCTACGGCAGACTGGGGATGAATgtaaatccaatatggcggccttGTGGTGCGGAAAAATTTCTCGTTCTCTGCAGAGAAAAAGCGTTTAATCGGCAAAGCGATTAATCAGATTGCTTATTTACCTGAAGTTAAGCTGTAATTACTGGAAATGCGTTAAAATCCATTGATTTTCATTATTCAAGTGAAGTCCATCTTCCGGCCCAAGTCATCAACATTTCAAATTTTGCGCGCGCGATTCAACAAATGACAGTGGTGAAAATCTTTCGACGAAAATGATTTCTTTAAGGACAGCACTAGCTGCACTGTGCAGCTACCATCGTGTTCAACTCATGAAGAGCTGTACCAAGTTACAGAAACGTTGCTTCTATGCACATTTTCAACGTTCTAGTGCCGATGTCAAGAATCTTGAGACGCAAAATCTCAAGCTTATCACAGCCACGTGGATGCAACGTTTAAAGGAAGAGGGTGTACCTGAAGCAGATCTATCAGTGAAATTCATCACAGAACATGTTCTTGGCAAGGAGAGGGCACGGGATTGTAGTGTGATAGAAAATGACCAGAATTTAACAAAGGAGGAGGCTAGAAAAATGAATGAGATGTGCCTTCAAAGACTTCAAAGAGTTCCAGTACAGTACATTATTGGTGAATGGGATTTTAGATATTTAACTTTGAAAATGAAGCCACCTGTGTTCATTCCAAGACCAGAGACTGAGgaaCTGGTAGATCTAGTTGCCACACATCATGGCCTTGCTGATGATAAAGGTGAAGGGTTTTCTTTCTTGGAAGTGGGATGTGGAAGTGGTGCCATTTGTTTGTCAATACTTTCAGAATATCCTCAGACTACTTGTGTAGCAATTGACAAGAACAAAGAAGCAGTTAGTCTCACAACAGAAAATGCAAACAGaTGCAATTTGAGCGACAGGATAATACTTCATCATGCTGATGTTCAATTCGTATTGCCATTACTTGGCTCCAGGAAATTTGATGCCATTATAAGCAACCCACCGTATATTCCTGAAAAAGACATGGCTCAGCTGGAGCCTGAGATTTCCAGTTACGAAGATGTACAAGCATTACATGGCGGGCGTGATGGACTGGACGTAATCAAGgaaattttgcgtgtttctccAATAGTACTCAAGCCTGAAAGTTCTGTGTGGTTAGAAGTGGACATTTCTCATCCTAAGTTAATTGATCAATGGATCAACAGCCACGATCTTGGTTTAATATATTTCACAGCGTTTGATGATTTCACACAGAGaaCAGTACTTGGCAAATGGCAGCAACTGTGTAGGAAGTCAGGAAGATTAACGATAGCGAGGATGGAATTGGATTACAATATGGTCAAACTTAAAAATGTGAAACTTGCGTGCCAAGATTTTGTCATATTGTCCGAAGATGATTGCTGCGTGACACGTGACGTCCCAAGGCAGATGCACAAGTCCTTGTATTGCGTTACCGGAGTTTTGGAACTGAGTGAAATGGTGAAGAAAAGAACTTGTACCAGCCCTCGTGGCAAAGTTAATGAATCATTTGAAATGAACCTACAGAAAGAGCGAAGCACgtcttcaacttcaactttgTCTTTTGAAGAAGAGGCCAAATGGGTGGAGAAGGGGTCGGAGGAACGCCGCCCCCCAGCTTCAGGGAAAGGGGAAGAGGAGAGGGTTAAAGGCCAAGACATACACTGCAGCATTGCGTGCAACAGTTCCTTAATGTGGCCACATGCACATAACACTGAGTCAGTGACTGCGGACAACATTGTTGACCTAGCAGGTAATTTCTGA

Protein

Uniprot

Uniprot term	Description
Q921L7	MTRF1L release factor glutamine methyltransferase OS=Mus musculus OX=10090 GN=Hemk1 PE=2 SV=2
Q9Y5R4	MTRF1L release factor glutamine methyltransferase OS=Homo sapiens OX=9606 GN=HEMK1 PE=1 SV=1
P74003	Release factor glutamine methyltransferase OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=prmC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05175	MTS	Methyltransferase small domain	Domain	Interproscan
PF17827	PrmC_N	PrmC N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR007848	Domain	Methyltransferase small domain	Interproscan
IPR040758	Domain	Release factor glutamine methyltransferase, N-terminal domain	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR050320	Family	Protein N5-glutamine methyltransferase	Interproscan
IPR019874	Family	Protein-(glutamine-N5) methyltransferase, release factor-specific	Interproscan
IPR004556	Family	Methyltransferase HemK-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18895	HEMK METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006479	Biological Process	protein methylation	Interproscan
GO:0008276	Molecular Function	protein methyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02493	hemK, prmC, HEMK; release factor glutamine methyltransferase	EC:2.1.1.297	Translation factors	ko03012	deepkoala