Detailed information of KAL9960066.1 in Oculina patagonica

Genomic Location: chr10:11364599...11418999
NR annotation: CAH3113014.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
Q5DRA9Protocadherin gamma-B2 OS=Pan troglodytes OX=9598 GN=PCDHGB2 PE=3 SV=1
Q5DRA8Protocadherin gamma-B4 OS=Pan troglodytes OX=9598 GN=PCDHGB4 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR001190DomainSRCR domainInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR000998DomainMAM domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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