Detailed information of KAL9960831.1 in Oculina patagonica

Genomic Location: chr10:21704737...21725819
NR annotation: CAH3164520.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BMN8Tyrosine-protein phosphatase Lar-like OS=Caenorhabditis elegans OX=6239 GN=ptp-3 PE=1 SV=1
P28685Contactin-2 OS=Gallus gallus OX=9031 GN=CNTN2 PE=1 SV=1
Q28178Thrombospondin-1 OS=Bos taurus OX=9913 GN=THBS1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF01390SEASEA domainFamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000082DomainSEA domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR050379FamilyType I Cytokine ReceptorInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR013099DomainPotassium channel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23036CYTOKINE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004896Molecular Functioncytokine receptor activityInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0019221Biological Processcytokine-mediated signaling pathwayInterproscan
GO:0019955Molecular Functioncytokine bindingInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan

TOP