Detailed information of KAL9961852.1 in Oculina patagonica

Genomic Location: chr9:11785105...11809719
NR annotation: XP_020622119.1, E3 ubiquitin-protein ligase MIB2-like isoform X4 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZIJ9E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus OX=9031 GN=MIB2 PE=2 SV=1
Q68LP1E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus OX=10116 GN=Mib2 PE=1 SV=2
Q96AX9E3 ubiquitin-protein ligase MIB2 OS=Homo sapiens OX=9606 GN=MIB2 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06701MIB_HERC2Mib_herc2DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF18346SH3_15Mind bomb SH3 repeat domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010606DomainMib-herc2Interproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR040847DomainMind bomb, SH3 repeat domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24202E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

TOP