Gene detail

Detailed information of KAL9962014.1 in Oculina patagonica

Genomic Location: chr9:14375271...14391876
NR annotation: XP_022808410.1, uncharacterized protein LOC111345401 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ACROYT_G031067

ATGGAGCTGAAGGCAGCTTGGAAGACGTTGTACCTTTTACTGATTTTCTTTACCGTTACCTGCTCAAAGACTCGAGCGCTCACTTTGAAGGCTGGAAAAGACAACGTGACTGCTACTGCACCATGGCTGTTTTCGTGTAAAAATATATCTTTTGATAAATCCTTCCCTGCCGGACGGCAAGTTTACGTTTTTGCCTCAGTAAGTCATAGTGTGAAAAGTCCAACACCTCGAAATGGCGCTGCAGTTTGGGTTGAGAATGTAACGGCAAGAAGATTCACGGTCTGTGTCCTTGAGTTTGGGGACGGGTCCAACGGAACAACTGAAATCAACTGGATCGCTATGCAGACTGTTCCTCGTGGATCGCAGCTGGGAACTGCTTTCTTAAGAGCTTGGAATGCTGAGACCAAATGCCAAAAGATCTATTTTGAAAAGCGTTTCAAGACTCTACCGACCGTGTTTGTGACTGCTAGTCACCAGTCTCCCAACAGGCCGCAAGACGCTATGGCAGTTTGGGTGGAAGATGTGGAAAATAACAACTTTAAACTTTGTTTCAGAGAAACAAAGATTTTCGGTGGAACACATAAAAGCATAAAAATCAACTGGATGGCATTAACCGATGTGACCTTGACCAAAAGCATTGTGTTTAACAACACTGCCTCACCTTCTCATCAACACAACAACGCTTTCTGCCAAACGATAAACTTTACAACGGCGTTTTTTGCTCCTCCTGTGGTGGTCGTGACGCCAAAGTACAGTTACAACAATACATATCCGTATTTGTCTCAATGTAATGCAGTTACAGCGTGGATCGAGCACTCATCCACAAAAGACATGAAGGTGTGTGCTAGAAACTACAACAGCAACCCGAAGAGTGAAGATATTATTACAGTCGATTACATGACGATTGGAGGATTTCAATTCCAACGTGGTCGTCGGCACATGCCACATATTCCAACATTGGGGTATTCTCATTGCGAAGTAATTCGTTTGAACCCTTCCTTGTTCAATCCCGACAAATCCATTGAAGTGCAGATCACTATCAATCATATGGATACCAGCAACAAGTCATATGTTCATGATGCCGCTGTGTCATGGGTTGAAAATGCCAGTTACCATTCATTTACTGCCTGTGTGATGGCGGCAGGCTTCAACGAGCGAAATTCACATGCTAACGTGACAGTCGATTGGATGGCGTACCAAGGGGCTCCGGTGGGTGGAAGTGCCGGGAAACTGCGCATGTCACAATGGTGGACTGGAACGACTTGTAAAGCTGTCAACTTTCCATTGGGAAAATTCTTAGTTAAACCTTCAGTGTTTGTGACTGCTGAGCACCACCATTCCGGACTAAAGCATGACGCTGCCAGTGTGTGGATTGAAGATGTCACACAATCGTCCTGTAAAATTTGTTTGAGAGAATTACAAAACTACGCAGGATCCCACAAAAACATTTCTGTTAATTGGTTGGCGTTTACGGATCTTCACAAGTCTCCCTTTTCAGAACATAATTCGATCTACTTTAAGAACAATAAACCCCCTCCTGGCGATAATAATAACGCGTTCTGCAAGGACGTCAACTTTACCAACTTTTACAACAACACCCCAGAGGTGTTCGTTTCTGCTGAACATTCATCAAAAGGAGGCCATCTAAGTCCAGCTTATAATGATATAGCTGCTTGGGTAGAGTATATCAACAAGACTACTGGCTTTCGTGTTTGTTTCAAGGAATTATTTGTAGCGAAATACGACCCCCTCTCCATTATTTACGCGGTATTACCAGGAAACCCAGATTACTGGATGAACTCAACTATCCTAACATACAATGAACTTTATCAAAGTCGCCTTCATCAATTCCTGACGCCTGCTGTTGGAAGTCACCCTCGTTGGATGCTGTGCTACCGCGCCCCCACTCACGGCTGGGCTGTCAGTACCTTCCACAGCAGGTGTGATGGGAAACGTAACACGGTTACCATCATCAAAAAGGGACAGTACGTGTTTGGAGGATACACCGATATACCTTGGGAAAGCAGTGGTGGCTATACTTCCACTTCCAACGCGTTCATATTTTCGCTACGCAACAAGGAAGGACTGGGGCCATTCAAGAGCGTAGTGAAGATACAACGATATGCGATTGTCAGGGGCTCAGCTTATGGTCCAACATTTGGTGATGGGTATGACATCTACATTGCAGACAATGCAAACAGCAACAGTAATTCATACACGGACTTTGGCGAATACAACGCCTACTCTGTTCCAAGTGGAGTACAAGACAAGTACACAATCCTAGCTGGGACTCGTAACTTCACACCTGACGACTTGGAAGTGTTTTACCTTGGTTAA

Transcript

rna-ACROYT_G031067.t0

ATGGAGCTGAAGGCAGCTTGGAAGACGTTGTACCTTTTACTGATTTTCTTTACCGTTACCTGCTCAAAGACTCGAGCGCTCACTTTGAAGGCTGGAAAAGACAACGTGACTGCTACTGCACCATGGCTGTTTTCGtgtaaaaatatatcttttgaTAAATCCTTCCCTGCCGGACGGCAAGTTTACGTTTTTGCCTCAGTAAGTCATAGTGTGAAAAGTCCAACACCTCGAAATGGCGCTGCAGTTTGGGTTGAGAATGTAACGGCAAGAAGATTCACGGTCTGTGTCCTTGAGTTTGGGGACGGGTCCAACGGAACAACTGAAATCAACTGGATCGCTATGCAGACTGTTCCTCGTGGATCGCAGCTGGGAACTGCTTTCTTAAGAGCTTGGAATGCTGAGACCAAATGCCAAAAGATCTATTTTGAAAAGCGTTTCAAGACTCTACCGACCGTGTTTGTGACTGCTAGTCACCAGTCTCCCAACAGGCCGCAAGACGCTATGGCAGTTTGGGTGGAAGATGTGGAAAATAACAACTTTAAACTTTGTTTCAGAGAAACAAAGATTTTCGGTGGAACACATAAAAGCATAAAAATCAACTGGATGGCATTAACCGATGTGACCTTGACCAAAAGCATTGTGTTTAACAACACTGCCTCACCTTCTCATCAACACAACAACGCTTTCTGCCAAACGATAAACTTTACAACGGCGTTTTTTGCTCCTCCTGTGGTGGTCGTGACGCCAAAGTACAGTTACAACAATACATATCCGTATTTGTCTCAATGTAATGCAGTTACAGCGTGGATCGAGCACTCATCCACAAAAGACATGAAGGTGTGTGCTAGAAACTACAACAGCAACCCGAAGAGTGAAGATATTATTACAGTCGATTACATGACGATTGGAGGATTTCAATTCCAACGTGGTCGTCGGCACATGCCACATATTCCAACATTGGGGTATTCTCATTGCGAAGTAATTCGTTTGAACCCTTCCTTGTTCAATCCCGACAAATCCATTGAAGTGCAGATCACTATCAATCATATGGATACCAGCAACAAGTCATATGTTCATGATGCCGCTGTGTCATGGGTTGAAAATGCCAGTTACCATTCATTTACTGCCTGTGTGATGGCGGCAGGCTTCAACGAGCGAAATTCACATGCTAACGTGACAGTCGATTGGATGGCGTACCAAGGGGCTCCGGTGGGTGGAAGTGCCGGGAAACTGCGCATGTCACAATGGTGGACTGGAACGACTTGTAAAGCTGTCAACTTTCCATTGGGAAAATTCTTAGTTAAACCTTCAGTGTTTGTGACTGCTGAGCACCACCATTCCGGACTAAAGCATGACGCTGCCAGTGTGTGGATTGAAGATGTCACACAATCgtcctgtaaaatttgtttGAGAGAATTACAAAACTACGCAGGAtcccacaaaaacatttctGTTAATTGGTTGGCGTTTACGGATCTTCACAAGTCTCCCTTTTCAGAACATAATTCGATCTACTTTAAGAACAATAAACCCCCTCCTGGCGATAATAATAACGCGTTCTGCAAGGACGTCAACTTTACCAACTTTTACAACAACACCCCAGAGGTGTTCGTTTCTGCTGAACATTCATCAAAAGGAGGCCATCTAAGTCCAGCTTATAATGATATAGCTGCTTGGGTAGAGTATATCAACAAGACTACTGGCTTTCGTGTTTGTTTCAAGGAATTATTTGTAGCGAAATACGACCCCCTCTCCATTATTTACGCGGTATTACCAGGAAACCCAGATTACTGGATGAACTCAACTATCCTAACATACAATGAACTTTATCAAAGTCGCCTTCATCAATTCCTGACGCCTGCTGTTGGAAGTCACCCTCGTTGGATGCTGTGCTACCGCGCCCCCACTCACGGCTGGGCTGTCAGTACCTTCCACAGCAGGTGTGATGGGAAACGTAACACGGTTACCATCATCAAAAAGGGACAGTACGTGTTTGGAGGATACACCGATATACCTTGGGAAAGCAGTGGTGGCTATACTTCCACTTCCAACGCGTTCATATTTTCGCTACGCAACAAGGAAGGACTGGGGCCATTCAAGAGCGTAGTGAAGATACAACGATATGCGATTGTCAGGGGCTCAGCTTATGGTCCAACATTTGGTGATGGGTATGACATCTACATTGCAGACAATGCAAACAGCAACAGTAATTCATACACGGACTTTGGCGAATACAACGCCTACTCTGTTCCAAGTGGAGTACAAGACAAGTACACAATCCTAGCTGGGACTCGTAACTTCACACCTGACGACTTGGAAGTGTTTTACCTTGGTTAAATCACCTTAAGATCAATTATATCAGCAATGTTTTACGaagttttacatttatttaatctAAAGTCTTTCATTTACTGTACTTTTAAGTTAATTTCATATTTCACCTAGTGGATCGCACAAGTTAGTGTTGTATTGGGGATATATCATTCGATTATTAGAAGGCTCAGgttatttcaagtttttttttctttaagctgTCAGTTATGGTTAAAATGTAAGCAAATTAGTTTGCTGCTAGGGCTGGCAGCAAAACACTGAATTGTATATGAAGAAATAAACATAACGTCAAGGGTTCAGGTCATAAGGATTGTCTTTGAATGACTATAAACTATACCCCTTCAAGCAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07534	TLD	TLD	Domain	Interproscan
PF09458	H_lectin	H-type lectin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006571	Domain	TLDc domain	Interproscan
IPR019019	Domain	H-type lectin domain	Interproscan
IPR037221	Homologous_superfamily	H-type lectin domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23354	NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan