Genomic Location: chr9:14962256...14977812
NR annotation: KXJ27465.1, Retrovirus-related Pol polyprotein from transposon 412 [Exaiptasia diaphana]
| CDS | ||||
| ACROYT_G031112 | ||||
| Transcript |
| rna-ACROYT_G031112.t0 |
| Protein |
| KAL9962047.1 |
| Uniprot term | Description |
|---|---|
| Q55E58 | Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum OX=44689 GN=pats1 PE=3 SV=1 |
| Q5S006 | Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00560 | LRR_1 | Leucine Rich Repeat | Repeat | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF13855 | LRR_8 | Leucine rich repeat | Repeat | Interproscan |
| PF12799 | LRR_4 | Leucine Rich repeats (2 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013762 | Homologous_superfamily | Integrase-like, catalytic domain superfamily | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR003591 | Repeat | Leucine-rich repeat, typical subtype | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR010998 | Homologous_superfamily | Integrase/recombinase, N-terminal | Interproscan |
| IPR011010 | Homologous_superfamily | DNA breaking-rejoining enzyme, catalytic core | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR050216 | Family | Leucine-rich repeat domain-containing protein | Interproscan |
| IPR025875 | Repeat | Leucine rich repeat 4 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48051 | - | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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