Genomic Location: chr9:22700752...22708885
NR annotation: KAJ7382837.1, hypothetical protein OS493_032473 [Desmophyllum pertusum]
| CDS | |||||
| ACROYT_G031759 | |||||
| Transcript |
| rna-ACROYT_G031759.t0 |
| Protein |
| KAL9962639.1 |
| Uniprot term | Description |
|---|---|
| Q8IWV2 | Contactin-4 OS=Homo sapiens OX=9606 GN=CNTN4 PE=1 SV=1 |
| Q62845 | Contactin-4 OS=Rattus norvegicus OX=10116 GN=Cntn4 PE=1 SV=1 |
| Q69Z26 | Contactin-4 OS=Mus musculus OX=10090 GN=Cntn4 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF01410 | COLFI | Fibrillar collagen C-terminal domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR002181 | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR036056 | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| IPR050149 | Family | Collagen superfamily | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR000885 | Domain | Fibrillar collagen, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0030020 | Molecular Function | extracellular matrix structural constituent conferring tensile strength | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| GO:0005201 | Molecular Function | extracellular matrix structural constituent | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19719 | COL2A; collagen type II alpha | - | Glycosaminoglycan binding proteins | ko00536 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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