Detailed information of KAL9963641.1 in Oculina patagonica

Genomic Location: chr8:3217102...3246441
NR annotation: XP_029180550.2, uncharacterized protein K02A2.6-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6AXF6SID1 transmembrane family member 1 OS=Mus musculus OX=10090 GN=Sidt1 PE=1 SV=1
Q9NXL6SID1 transmembrane family member 1 OS=Homo sapiens OX=9606 GN=SIDT1 PE=1 SV=2
Q6Q3F5SID1 transmembrane family member 1 OS=Rattus norvegicus OX=10116 GN=Sidt1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF13965SID-1_RNA_chandsRNA-gated channel SID-1FamilyInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR025958FamilySID1 transmembrane familyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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