Gene detail

Detailed information of KAL9965016.1 in Oculina patagonica

Genomic Location: chr8:22415597...22418478
NR annotation: KXJ09023.1, Retrovirus-related Pol polyprotein from transposon opus [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P10273	Gag-Pol polyprotein OS=Feline leukemia virus OX=11768 GN=pol PE=3 SV=2
P31792	Pol polyprotein (Fragment) OS=Feline endogenous virus ECE1 OX=11766 GN=pol PE=3 SV=1
P10272	Gag-Pol polyprotein OS=Baboon endogenous virus (strain M7) OX=11764 GN=pol PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47266	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan