Detailed information of KAL9965067.1 in Oculina patagonica

Genomic Location: chr8:23120334...23136115
NR annotation: XP_022790364.1, protein SMG9-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B5DDX6Nonsense-mediated mRNA decay factor SMG9 OS=Xenopus tropicalis OX=8364 GN=smg9 PE=2 SV=1
Q05AW9Nonsense-mediated mRNA decay factor SMG9 OS=Xenopus laevis OX=8355 GN=smg9 PE=2 SV=1
Q9H0W8Nonsense-mediated mRNA decay factor SMG9 OS=Homo sapiens OX=9606 GN=SMG9 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
----------

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR039177FamilyNonsense-mediated mRNA decay factor SMG9Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14270UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18735SMG9; protein SMG9-Messenger RNA biogenesisko03019deepkoala

TOP