Gene detail

Detailed information of KAL9966264.1 in Oculina patagonica

Genomic Location: chr7:3809571...3823822
NR annotation: XP_022782629.1, proline-rich protein HaeIII subfamily 1-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-ACROYT_G024312.t0

ACGACATGAGACTCGCTTACTATTTCTTCAGCCATTTTGGTTAACCGGCAACCTTTCGTATTTTTGGACACTCTCGGAGATCTTGGATTTCCTAACAGTATTTGAGGAACACCTTAGGAAAGTATGGACACTCTAGACTATAGAGGTTGACTGTGAAGGTAAACAAGAAATTTGTGACAGGGGGAGTAAAGGGGGCCCTGCTCAGCCAGATACAGGGAGGTGCCAGACTCAAGAAGGCGGTAACCAATGACAGGAGTGCACCAGTGGTAGCAGGAAATAAACCAAGTCCAAGTAGTAGCAGTGGAAATGTAGGAGGAGGCAGTAGTGGCGGCGGTATGGGTGCATCCCCCATGGGACTTGGCGGACTTTTTGCAGGAGGGATGCCAAAACTCAAATCAGCGGGGGATAGAGGAAAACCAGGAACTGGAGGAGCCAAAGGCCCAGCTATGAGACCACCAGGCTTTAAACCACCTTCACCAAACAATTCCAACACATCGCTGCCTCCTGCTCCGAGTGGTAATTCAAGACCACTCCCTACTCCACCAGGTAAAGCACCAGGCTTCGCAcctccaccaccgccaccactgTCAAATAAGCCATCAGCGCCTGACAACTCCAGACCCCTTCCAATACCACCATCGGGATCAGGATCAAGACCATTACCAGCACCGCCGCCAGGACCATCCGGGGGTGGACCTAGAGCACCACCCTCAATGAGACAAGGTCCTCCGCCTCCACCGCCAGGAAGAGGTGGTGCTCCACCTCCGCCACCACCATCCACATCAGCTACTAGAGTATCCGCACCTCCACCTCCACCAACAAGGAGTAATCCAAATATGGCTCCTCCACAACCTCCTCCACCACGAGGAGGTCCACCACCACCTCCTCCCTCAAGGGGTGGTCCACCACCCCCACCTCCTAGTAGGGCTCCTCCGCCACCATCTTCAAGACCGCCATCACAAGCACCTCCACCACCACCTCCCACTAAAATTCCTTCGAAGGGGAGTTCTGGGCCACGAGGATCAGGTCCTTTACCCCCTCCACCTGCTATGGGGGGAGGGCTTGGGCCACCTCCTCCACCTCCAGCTAGAAATACAATGGAGAGCAAGAGATCAGGGCTCCCACCTCCACCGCCACCGATGTCGTCAGGGAGATCTAATAACATGATGAATGGACCAACAAGAAACTCGCTTCCACCACCTCCCCCAGATGCAATGACAGGCTCATCAGAAGaTGACTTTGAATCAAGATTTTCCTTTAGTACAGATTTACCTCCACCAGAGCCTTATGTAGAAACAGCAAAAACATATCCAAGCAAAAATCCCAAGAAAAGTGGTGGTTCAACAAAATCTTCTGGAAATTCAAGTGGAGTAAGGGCAAACCCTCCCCCTCCACCACCTTCAAGAGGAGCTCCGCCTCCACCACCGCCTCCTCCCAGGAGATAAGTCTTTTGTCAAAGTTTCATAGCAATTCTAGGAGGACcaaaattttttataataattattataatattgaTCCAGATTTGTGGACATTACTTGGTGGTCTTTGTTTTCAGAAGACCTCTTTTCATAGCCGTCAATTCTTAAACCTCATGGTTTGTGGAGGTTGGAGAAATTTGTTGACATTTTGCAACAGTAATGGACAATCTGTTAGCAAAAGAGTATGGAATCTACATATTCTATAGACAAATCACttgtgaaaatgaaatttatgTTTTGTATTCTTTCTTTGCTGTAAATGAAAAGGGTATAGCACCTCTTAGTCATTAGATTTCCTTGTAAAACTAGAGAGAAACAAGGAAAAATAGGGCTCAAATAGTGTTACTTGTATCCCAGTATGGGTCTAGTGGTTGAAACAATAGTGTCGATTATTTCAATaactaataataattaataaaaaatgcaATGCTGTGCAGTAGCTAATGATAATTGTGTTTGCCAGATTTAATTGTATAATTATCATTTTAGAAATAAAAGACACTGTCTTGTAAAACCACAacacaacaaaataaattttaattatgtCTTTGCAATAGGCATATTTTTCTGTATAATGTATCCTTGATAATTATTAGTACTGACAGCTCTAAACAGAGTCAATCAATAATAttatagaatattgtttgtatACCCAGTGTCCATTTctttgtaaataaaatgaaaatttgatgTTATAGCACTTTCAAATGGCCTCAAGTTAACAATGTGTTTGTCATAAGCAAAGTCTAATAGCATGAGAAAAGTGACCTCaaatatatactacttattaaccaggagtgaggtcattacagggaaatctcagaccgaggccttgatcgAGATTATGCACTTACTGACTGGGCTGGCATACAGACGGATCACAGCAAGGTCTGTGTAAATTGACAAATAAAAATAGAGGGTGGTAAAGGTTTTTTTCGTGATTCGTGAATTGTCTTTTTTTCCATGCATTGTGAAATAGCTATTTTTTCCATGAAACATGGTTTGGCTACAAAGCCACGAATcaaatttttttcttgagaACTGCAAAATGatagttgtttttgttgttttttcttacaaaatgtGACTGTAAACCATGATTCTttcttttgtccaaaaaatCATCTTAGAAAGCATTTAAAAACAAGACTAAGTGTGTGGTAAATTGCATGACCGTGACTGATGGTCATTCTGGCCTCCAGGTCACTGTACTCTGATAGGTTGTTAAACACCTTTTGTCTTGGTTTCATGAAAtgaccattttattttttgatgaaaCATGTTCAAGAccctacccccaccccctaaaaaaagtttcagtatctgtcctgtataaaatgtgcCTGCTTTCTGGACGCAAactgctataaaacaaatgtgtttttttttttgacaaaattatctgTG

Protein

Uniprot

Uniprot term	Description
Q9P6R1	Verprolin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vrp1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02205	WH2	WH2 motif	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003124	Domain	WH2 domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19475	WIPF; WAS/WASL-interacting protein	-	Membrane trafficking	ko04131	deepkoala