Gene detail

Detailed information of KAL9966457.1 in Oculina patagonica

Genomic Location: chr7:6387181...6403414
NR annotation: KAJ7349556.1, hypothetical protein OS493_038580 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ACROYT_G024536

CTGCTATATAAGCCTGACATAACTTTTGAAGTAGTGACATTTCACGCAAACCTCGTAGAGGGAACTGATACCAGAAAGCCAATAAGGCCTAGCAGGGTTTTAAAGATGACAATGCACGTGTTCGTTGTTGGTGTTTTCCTTGTCGCATCCCAAGTGGTCCCAAGTGATGCTGCCCCATGGAGTTCCTTTACAGAGCTTTCTGACGAAATCACTTTGGACAAATATAAGGTCGAAAAACGCCAACTCCCACCAGCTTTACGGGTATGCAGCCCAGAAGAGCTGGACGAATCTCTCAGTTGTCCTGGTTATAAAGCATTTGGTTGGTGTGAAAGCAACAACATGGCAATATTAGCTTTTATGAGGGAAAACTGTAACCTTACCTGTGGAATCTGTCAACTATGCACCCCTGAAGAGCTGGACGAACCTCTGAGTTGTCCTGGTTACAAGGCATTTGGTTGGTGTGATAGCAGCAACATGATGATATTAGCTTTCATGAGGGAAAACTGTAACCTTACCTGTGGAATCTGTCAAGTACCATCGACGACGCTACCGCCGACGACCACACCACCCCCGACGACTACACAACCCCCGACGACCACACCACCCCCGCCGACTACACAACCCCCGACGACTACACAACCCCCGACGACTACGCCACCCCCGACGACTACACCACCCCCGACGACTACACCACCCCCGATTCTGAACAATCAAGACAGCAATCAGTGGTACAGAGATGGTATCAAGCTGATCCAGGACAACCTTAAGGTAAAACCGAACAACAATACTGCAAAAAGCGCCATTGTCTTCATTGGCGATGGAATGGGTATCACAACCGTCACTGCTGCTCGCATCCTGGACGGACAGATGAAAAACCAATCAGGCGAGGAGAATGTTTTGAGCTGGGAGGAATTTCCTTGGTCAGCCCAGGTGAAAACGTATTGTGTCGATCAGCAAGGTGCAGATTCGGCCGCGTCGGCGACGGCGCTTCTAAATGGAATTAAGACTAACGATGGTGTTCTTGGAATGAACGAAAGTGTAAAAAAAGGCTACTGTTCCACTGCAAGTGCAAATCGTAGAGCGATCTCTATTCTGTCGCTCGCGGAAATGGCTGGAATGTCAACTGGGGTTGTGGCCACTACGCGTGTGACACACGCAACTCCCGCGAGCGCGTACGCGTATTCTGCGGATCGTGGATGGGAGAGTGACCAAGACAAGATGTACGAGGCAGAGGATGATGCGTCTGCGTGCAAAGATATTGCCTTGCAACTTGCTGAATACCCGTATGGTGACGGAATGGAAGTCATCTTTGGCGGGGGTCGTAGAGCGTTCATGCATGAAAATCAAGCTGACCCTGAGTACCCGGATAAGAGAGGAGAGAGACTGGACGGCAGAGATTTGATACAAGAGTGGGTGAACAAACATCCGAACTCACAGTACGTATGGAACAAAACCGCGTTTGATCAGATTGACACGAGCACGGTTGACCATGTGATGGGGCTCTTTGAGCGTTCTCACATGAATTACGAGGTGAACCGGGCTGAGGATGTTGCTGGTGAACCATCAATAGCAGAGATGACAGAAAAAGCCATCCAAATACTACAGAAAAACCCTAAAGGCTTCTTCTTGTTAGTTGAAGGAAAAGTAGTTCTCTCAAACAGAAGTATTTACTATCGCATGATGCCTCGTAAGAAAACTCAGGAAACCAGTTCATTTCACCAACTCCAGCAACAACAAGACCTGCAAAAAGGAAAGAAGTCTCACACATGCCAACAGTGCGGCAAGTGCTTCAACCGAGCAGGGCATCTCCAGGAACATAAACGAATACACACAGGAGAGAAGCCATTTACGTGCAAACAGTGCGGCAAGTGCTTCAGCCGAGCAGGAGGTCTCCAACGACATAAGCGAATACACACAGGAGAGAAGCCATTTACGTGCAAACAGTGTGGCAAGTGTTTCAGCCGAGAAGAAAGTCTCCATCTACATAAGCGAACACACACAGGAGAGAAGCCATTTACGTGCAAACAGTGTGGCAAGTGTTTCAGCACAGCAGGAAATCTTCATCAACATGAACGAATACATACAGGAGAGAAGCCATTTACGTGCGAACAATGTGGAAACTGCTTCCGCCATGCAGGAAATCTCCAGCAACATAAATTAATACACACACGAGAGAAGCCGTTTACGTGCAAACAGTGTGGCAAGTGTTTCAGCCGAGCAGGGCATCTCCAGGATCATAAACGAATACACACCGGAGAGAAGCCATTTACGTGCAAAAAATGTGGCAAGTGCTTCAGCCAAGTAGGACATCTCCATCAACATAAAAAAATACACACAGAAGAGAAGCCGTTTACATGCAAACAATGTGGCAACGGCTTCAGTCGAGCAGGACATCTCCATCAACATAAACAAATACACTCAGCAGAGAAGCCGTTTACATGCAAACAGTGTGGCAAGTGCTTCAGTCAAGCAGGGAATCTCCATCAACATGAACGAATACACACAAGAGAGAATCCATTTACATGCAAACAGTGTGGCAAATGCTTCAGCCAAACAGGAATCCTTTTACAACATAAACGAATACATACAGGAGAGAAGCCGTTTACATGCAAACAGTGTGGCAAGTGTTTCAACCACTCAGGACACCTCAAGCGACAAAAACGGATACACACAGCAGAGAAGCCATTTACATGCAAACAGTGTGACAAATGTTTCAGGCAAGCGAGCGTACTCCAGCGCCATAACATGATACACACAAGAGGGAAGCCTGGGCAGCATGACGCAGAAAAGCTAACACACTGCAGTTCTGTGCCTGTCTCTGAGTGTGACGACAATTCTCTTACAGATGCCTCCCCTTTACAGGTTCCCAGTCCAGCCGACCAGGTTGAAACATACAGCTGTTGGATTTGCCAGGAAGAATTAAGTAGTCATGCTTTCCTTGTTGAACACTATGATAATCATATGAAATAA

Transcript

rna-ACROYT_G024536.t0

TGTacttatttatttcttaaaCCGTCAAATTGGCGCCACACGTTTCTTTATCTGCTAACATTACAGGCTGCTATATAAGCCTGACATAACTTTTGAAGTAGTGACATTTCACGCAAACCTCGTAGAGGGAACTGATACCAGAAAGCCAATAAGGCCTAGCAGGGTTTTAAAGaTGACAATGCACGTGTTCGTTGTTGGTGTTTTCCTTGTCGCATCCCAAGTGGTCCCAAGTGATGCTGCCCCATGGAGTTCCTTTACAGAGCTTTCTGACGAAATCACTTTGGACAAATATAAGGTCGAAAAACGCCAACTCCCACCAGCTTTACGGGTATGCAGCCCAGAAGAGCTGGACGAATCTCTCAGTTGTCCTGGTTATAAAGCATTTGGTTGGTGTGAAAGCAACAACATGGCAATATTAGCTTTTATGAGGGAAAACTGTAACCTTACCTGTGGAATCTGTCAACTATGCACCCCTGAAGAGCTGGACGAACCTCTGAGTTGTCCTGGTTACAAGGCATTTGGTTGGTGTGATAGCAGCAACATGATGATATTAGCTTTCATGAGGGAAAACTGTAACCTTACCTGTGGAATCTGTCAAGTACCATCGACGACGCTACCGCCGACGACCACACCACCCCCGACGACTACACAACCCCCGACGACCACACCACCCCCGCCGACTACACAACCCCCGACGACTACACAACCCCCGACGACTACGCCACCCCCGACGACTACACCACCCCCGACGACTACACCACCCCCGATTCTGAACAATCAAGACAGCAATCAGTGGTACAGAGATGGTATCAAGCTGATCCAGGACAACCTTAAGGTAAAACCGAACAACAATACTGCAAAAAGCGCCATTGTCTTCATTGGCGATGGAATGGGTATCACAACCGTCACTGCTGCTCGCATCCTGGACGGACAGATGAAAAACCAATCAGGCGAGGAGAATGTTTTGAGCTGGGAGGAATTTCCTTGGTCAGCCCAGGTGAAAACGTATTGTGTCGATCAGCAAGGTGCAGATTCGGCCGCGTCGGCGACGGCGCTTCTAAATGGAATTAAGACTAACGATGGTGTTCTTGGAATGAACGAAAGTGTAAAAAAAGGCTACTGTTCCACTGCAAGTGCAAATCGTAGAGCGATCTCTATTCTGTCGCTCGCGGAAATGGCTGGAATGTCAACTGGGGTTGTGGCCACTACGCGTGTGACACACGCAACTCCCGCGAGCGCGTACGCGTATTCTGCGGATCGTGGATGGGAGAGTGACCAAGACAAGATGTACGAGGCAGAGGATGATGCGTCTGCGTGCAAAGATATTGCCTTGCAACTTGCTGAATACCCGTATGGTGACGGAATGGAAGTCATCTTTGGCGGGGGTCGTAGAGCGTTCATGCATGAAAATCAAGCTGACCCTGAGTACCCGGATAAGAGAGGAGAGAGACTGGACGGCAGAGATTTGATACAAGAGTGGGTGAACAAACATCCGAACTCACAGTACGTATGGAACAAAACCGCGTTTGATCAGATTGACACGAGCACGGTTGACCATGTGATGGGGCTCTTTGAGCGTTCTCACATGAATTACGAGGTGAACCGGGCTGAGGATGTTGCTGGTGAACCATCAATAGCAGAGATGACAGAAAAAGCCATCCAAATACTACAGAAAAACCCTAAAGGCTTCTTCTTGTTAGTTGAAGGAAAAGTAGTTCTCTCAAACAGAAGTATTTACTATCGCATGATGCCTCGTAAGAAAACTCAGGAAACCAGTTCATTTCACCAACTCCAGCAACAACAAGACCTGCAAAAAGGAAAGAAGTCTCACACATGCCAACAGTGCGGCAAGTGCTTCAACCGAGCAGGGCATCTCCAGGAACATaaacgaatacacacaggagagaagccatttacGTGCAAACAGTGCGGCAAGTGCTTCAGCCGAGCAGGAGGTCTCCAACGACATAagcgaatacacacaggagagaagccatttacgtgcaaacagtgtggcaagtgtttcagccGAGAAGAAAGTCTCCATCTACATAAgcgaacacacacaggagagaagccatttacgtgcaaacagtgtggcaagtgtttcagcaCAGCAGGAAATCTTCATCAACATGAACGaatacatacaggagagaagccatttacGTGCGAACAATGTGGAAACTGCTTCCGCCATGCAGGAAATCTCCAGCAACATAAATTAATACACACACGAGAGAAGCCGTTTacgtgcaaacagtgtggcaagtgtttcagccGAGCAGGGCATCTCCAGGATCATAAACGAATACACACCGGAGAGAAGCCATTTACGTGCAAAAAATGTGGCAAGTGCTTCAGCCAAGTAGGACATCTCCatcaacataaaaaaatacacacagaaGAGAAGCCGTTTACATGCAAACAATGTGGCAACGGCTTCAGTCGAGCAGGACATCTCCATCAACATAAACAAATACACTCAGCAGAGAAGCCGTTtacatgcaaacagtgtggcaagtgcttcaGTCAAGCAGGGAATCTCCATCAACATGAACGAATACACACAAGAGAGAATCCATTtacatgcaaacagtgtggcaaatgCTTCAGCCAAACAGGAATCCTTTTACAACATAAACGaatacatacaggagagaagccgtttacatgcaaacagtgtggcaagtgtttcaacCACTCAGGACACCTCAAGCGACAAAAACGGATACACACAGCAGAGAAGCCATTTACATGCAAACAGTGTGACAAATGTTTCAGGCAAGCGAGCGTACTCCAGCGCCATAACATGATACACACAAGAGGGAAGCCTGGGCAGCATGACGCAGAAAAGCTAACACACTGCAGTTCTGTGCCTGTCTCTGAGTGTGACGACAATTCTCTTACAGATGCCTCCCCTTTACAGGTTCCCAGTCCAGCCGACCAGGTTGAAACATACAGCTGTTGGATTTGCCAGGAAGAATTAAGTAGTCATGCTTTCCTTGTTGAACACTATGATAATCATATGAAATAA

Protein

Uniprot

Uniprot term	Description
P08289	Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2
P09487	Alkaline phosphatase, tissue-nonspecific isozyme OS=Bos taurus OX=9913 GN=ALPL PE=1 SV=2
P09242	Alkaline phosphatase, tissue-nonspecific isozyme OS=Mus musculus OX=10090 GN=Alpl PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF01549	ShK	ShK domain-like	Domain	Interproscan
PF00245	Alk_phosphatase	Alkaline phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR017850	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR050636	Family	C2H2-type zinc finger domain-containing protein	Interproscan
IPR001952	Family	Alkaline phosphatase	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR003582	Domain	ShKT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47772	ZINC FINGER PROTEIN 200	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016791	Molecular Function	phosphatase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala