Detailed information of KAL9968405.1 in Oculina patagonica

Genomic Location: chr7:32515999...32518424
NR annotation: XP_020616360.1, homeobox protein Hox-C6-like isoform X2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8AWY9Homeobox protein Hox-B7a OS=Danio rerio OX=7955 GN=hoxb7a PE=2 SV=1
P14840Homeobox protein Hox-B4 OS=Gallus gallus OX=9031 GN=HOXB4 PE=2 SV=1
P09017Homeobox protein Hox-C4 OS=Homo sapiens OX=9606 GN=HOXC4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001827Conserved_siteHomeobox protein, antennapedia type, conserved siteInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR050296FamilyAntennapedia-type homeoboxInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR001356DomainHomeobox domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45659HOMEOBOX PROTEIN HOXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952Biological Processanterior/posterior pattern specificationInterproscan

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