Gene detail

Detailed information of KAL9970694.1 in Oculina patagonica

Genomic Location: chr6:29237076...29244522
NR annotation: KAJ7394747.1, peptidase M10A [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P28862	Stromelysin-1 OS=Mus musculus OX=10090 GN=Mmp3 PE=2 SV=2
O55123	Stromelysin-2 OS=Mus musculus OX=10090 GN=Mmp10 PE=2 SV=1
O18927	Collagenase 3 OS=Equus caballus OX=9796 GN=MMP13 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00413	Peptidase_M10	Matrixin	Domain	Interproscan
PF01471	PG_binding_1	Putative peptidoglycan binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021158	Binding_site	Peptidase M10A, cysteine switch, zinc binding site	Interproscan
IPR001818	Domain	Peptidase M10, metallopeptidase	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR002477	Domain	Peptidoglycan binding-like	Interproscan
IPR036365	Homologous_superfamily	PGBD-like superfamily	Interproscan
IPR036366	Homologous_superfamily	PGBD superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10201	MATRIX METALLOPROTEINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0030574	Biological Process	collagen catabolic process	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan