Detailed information of KAL9972629.1 in Oculina patagonica

Genomic Location: chr5:15023158...15034228
NR annotation: XP_020617623.1, uncharacterized protein LOC110055579 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28IV3RNA polymerase II-associated protein 3 OS=Xenopus tropicalis OX=8364 GN=rpap3 PE=2 SV=1
Q68FQ7RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00931NB-ARCNB-ARC domainDomainInterproscan
PF01753zf-MYNDMYND fingerDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002182DomainNB-ARCInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR051966FamilyRNA polymerase II-associated protein 3Interproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46423RNA POLYMERASE II-ASSOCIATED PROTEIN 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0043531Molecular FunctionADP bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0101031Cellular Componentprotein folding chaperone complexInterproscan

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